Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo4g03335 ATGGAGAATCAGCCTTCGAATGGAAGAAAGGCAATGGAAGAAGAACTAATCAAAGGGCGTGACACAGCAAACCAGTTACTTGAAATACTTGTTCATAAATCCAACACTACTCATCATGGAGGTGTAGAAGTAGAAGGGTTAGTGCTACCTTTTGCTCAAGATCTCGTTCGCAAGGTACTCAGATCATTCACAAATACCCTTTTGCTATTGAACACTCATAGTGATGTCTCCGATGAGATTGTTATGCCTATCACTATCAAAGATGTCTATTCCTCCGTGAAATGCCCAAAGCCTGAGGATAAGGATGAGGCTTGCAAGGGTTTTTTCAACGCTAAAAGACGAAGAGGATGCTACAAGAGAAATGCACCAACATGGGAGAAGAACAGCTCAATTCTGATGGAAGATTGCTATGCATGGAGAAAGTATGGACAGAAAATGACAATGAATGCAAAATACCACAGGAACTACTACAGATGCACTCACAAATATGATCGGGGTTGTCCAGCAACCAAACAGGTTCAGAGAATTCAAGAAGACCCTCCATTATACCGGACAACTTATTATGGTCATCACAATTGTAAAAGCTCTTTAAGTCCAGAAATACTGTTGGAACCAGCTTCTTCTTCTGACTCTTCTATGTTCCTTAGCTTCAGTAACACCTTCCCAAGCAAAGAAGAAAACCCATTTTCATCACCACTTTTTTCATCCATGAAACAGGAGCCTATGGAAGTGATTCAGGATGACCATATTGTTCACAACCAATTACCCTCATCAGATTACCACCTGTTATGTGACTATGAACTTGATTTCAAATATTTGAGGCATGATACTATTTGA 837 0.4014 MENQPSNGRKAMEEELIKGRDTANQLLEILVHKSNTTHHGGVEVEGLVLPFAQDLVRKVLRSFTNTLLLLNTHSDVSDEIVMPITIKDVYSSVKCPKPEDKDEACKGFFNAKRRRGCYKRNAPTWEKNSSILMEDCYAWRKYGQKMTMNAKYHRNYYRCTHKYDRGCPATKQVQRIQEDPPLYRTTYYGHHNCKSSLSPEILLEPASSSDSSMFLSFSNTFPSKEENPFSSPLFSSMKQEPMEVIQDDHIVHNQLPSSDYHLLCDYELDFKYLRHDTI 278
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo4g03335 278 SMART WRKY_cls 133 195 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pumo4g03335 278 Gene3D WRKY domain 121 196 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pumo4g03335 278 SUPERFAMILY WRKY DNA-binding domain 130 194 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pumo4g03335 278 ProSiteProfiles WRKY domain profile. 128 196 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pumo4g03335 278 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 18 214 IPR044810 GO:0003700
Pumo4g03335 278 Pfam WRKY DNA -binding domain 134 194 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo4g03335 Pumo-Chr4 70510341 70512200 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo4g03335 15 195 WRKY Transcription Factor Family AT3G56400 37.500 1.53e-32 119
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Pumo4g03335 WRKY 1.4e-21 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo4g03335 - - gmx:102663141 449.514