Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo4g03327 ATGACGTCAGGAACGAGGCAGCCGACGTGGAAGGAGCGAGAGAACAACAAGAGAAGAGAGCGGCGAAGGAGAGCCATCGCGGCGAAGATCTTCTCCGGTCTGAGAATGTACGGCAACTACAAGCTCCCGAAGCACTGCGACAACAACGAAGTTCTCAAAGCTCTCTGCAACGAAGCCGGTTGGACCGTCGAAGCCGACGGCACCACCTATCGCAAGGGATGCAAGCCTCCTGTTGAACGCATGGACATAGTAGGTGGTTCTGCAGCTGCAAGCCCATGCTCATCTTACCATCCAAGTCCCTGTGCTTCCTACAACCCTAGTCCAGGCTCTTCTTGCTTACCGAGTCCTCGCTCATCGCCTTATCCTCCGAATCCTAACGGTGATGGCAATTCTCTCATTCCATGGCTGAAAAACCTTTCCTCTGGCTCATCATCAGGATCCTCTTCCAAGCTTCCTCAGCTGTACATTCCAGCCGGCTCCATCAGCGCTCCCGTCACTCCTCCAATCAGCTCTCCATCGTCCCGAAATCCCCGAGTCAAGGCCGACTGGGAGGAGCAGTCCACTCGTCCTGCAGCGTGGGGCAGTCCGGCATACACCTTCCTGCCCTCTTCAACTCCTCCAAGCCCAGGCCACCAGGTTGCCGATACAGATTGGTTTTCTAAGATCAGGATTCCTCAGGGAGGACCAACACCAACTTCTCCAACCTTCAGCCTGGTCTCTCCTAACCCATTTGGCCTCAAGGAAGATGTTATTATGGGTGGCAGCAGTTCCCTTAAGTGGACGACACCAGGGCCAAGTGGAACATGTTCTCCAATTGTAGCTGCAGGCTCTGAAAACACTTCTGACATTCCAATGGCTGAAGCAATTTCAGATGAATTTGCCTTTGGAAGCAGCTCATCAGGTTTAGTGAAGCCCTGGAAAGGAGAAAGGATCCATGAAGCTTCTTTCGGAACAGATGATCTTGAGCTCACTCTTGGGAGCTCAAAGACCAGGTTGCTCCATAAGTGA 1008 0.5308 MTSGTRQPTWKERENNKRRERRRRAIAAKIFSGLRMYGNYKLPKHCDNNEVLKALCNEAGWTVEADGTTYRKGCKPPVERMDIVGGSAAASPCSSYHPSPCASYNPSPGSSCLPSPRSSPYPPNPNGDGNSLIPWLKNLSSGSSSGSSSKLPQLYIPAGSISAPVTPPISSPSSRNPRVKADWEEQSTRPAAWGSPAYTFLPSSTPPSPGHQVADTDWFSKIRIPQGGPTPTSPTFSLVSPNPFGLKEDVIMGGSSSLKWTTPGPSGTCSPIVAAGSENTSDIPMAEAISDEFAFGSSSSGLVKPWKGERIHEASFGTDDLELTLGSSKTRLLHK 335
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo4g03327 335 MobiDBLite consensus disorder prediction 1 21 - -
Pumo4g03327 335 PANTHER BES1/BZR1 HOMOLOG PROTEIN 3-RELATED 1 331 IPR033264 GO:0003700|GO:0006351|GO:0009742
Pumo4g03327 335 Pfam BES1/BZR1 plant transcription factor, N-terminal 3 140 IPR008540 -
Pumo4g03327 335 MobiDBLite consensus disorder prediction 107 135 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo4g03327 Pumo-Chr4 70319517 70323496 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo4g03327 1 331 BZR Transcription Factor Family AT1G78700 65.680 3.47e-123 355
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF BES1 Pumo4g03327 BES1_N 1.8e-65 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo4g03327 - - gmx:100795898 556.599
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo4g03327 4 70319517 70323496 Pumo4g03327 4 70319517 70323496 ECH