Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo4g03326 ATGACGTCGGGGACGAGGCTACCCACGTGGAAGGAGAGAGAGAACAACAAGAGGAGAGAGAGAAGAAGAAGAGCCATAGCGGCGAAGATCTTCTCGGGTCTGAGGATGTATGGGAACTTCAAACTCCCCAAACACTGCGACAACAATGAAGTCCTCAAAGCTCTCTGCAACGAAGCTGGTTGGACCGTTGAACCCGATGGAACCACTTACCGCAAGGGATGCAAGCCCTTAGAGCGCATGGACATAGTTGGTGGATCATCAGCAGCAAGCCCTTGCTCATCATACCATCCAAGTCCATGTGCTTCCTACAATCCAAGCCCTGGCTCATCATCCTTCCCAAGCCCATCCTCATCTCCTTACACCCAAATTCCCAATGCTGATGGCAACTCCCTCATTCCATGGCTCAAAAACCTCTCCACTGCTTCATCTTCAGCATCCTCTCCCAAGCTTCCCCACCTCTATCTCCACAGTGGCTCCATCAGTGCTCCTGTCACCCCTCCTCTGAGCTCCCCAACCGCCAGAACACCGCGAATCAACGTTGAGTGGGATGACCAGTCTGCACGGCCGGGGTGGACCAGACAGCAGCACTACTCATTCCTGCCGTCTTCCAGTCCTCCCAGCCCCGGCCGCCAGGTGGTCGACCCTGAATGGTTTGCTGGGATCAAACTTCCCCATGTTAGTCCAACCTCACCCACATTCAGCTTGGTCTCCTCAAACCCTTTTGCCTTCAAGGAAGATGGCTTGGTGGCTGGCAGCGGTTCGCGAATGTGGACTCCTGCTCAGAGTGGAACATGCTCTCCTGCTATCCCACCAGGCTCTGATCACAATGCTGACATTCCTATGGCTGAAGCTGTTTCAGATGAATTTGCATTTGGAAGCAACATGTTGGGGCTTGTGAAGCCATGGGAGGGAGAAAGGATCCATGAGGTATTTGGATCAGATGATCTTGAACTCACACTTGGTAACTCAAAGACCAGTCGTGGTGTTGCTGTTTCTCTCTCCTCTGCCTCTGTGACCCTTTGGCACAGAAGAGAGAAAATGGCACCTCAATTGGCCGCAACGCACTCTTCTCTTCTCCGCGTTCCTCCCTCTTCTGCTTCTCTCTGTTTCAGAAGGAATAAAGATTTGATTCCAGAAAGATGCACTATAATCAACAGGAAAAAGAATCATGCCATAACAGCTTTTGCAGGCAATTCTCTTGGAAAATCAGCTATCCAACTCAATGCTGTTTCATCTCCACTATTTACTGATAAAGAAGCTCACCTCTCACTCAGACTTCCTATGTCTCGAAGATGCAACACTACGATCCGACAAGCATTTATATATCATTCATCAGGTTTCCGAATCCCAGCAAATGCTGAGAAGCCTGAATGGTGGTGGAGGACTTTATCCTGTGTTCCCTATCTGTTAGCATTGCAGATATCTGCAGCTGGGATTTATCTAGAACCTATCCTTGAAAAATTTCCATTGTTTCAGAGTTTGATTTTTTATATCCCAGGAGCTGTCAACCGATTGCCAAACTGGTTCCCTATGTTATATTGCTATGTGGCTATCGTATGGGTGGTAAAAAACAAGGACTTGCCCCTTATCTTGAGATTCCATGTAATGATGGGAATGCTACTGGAACTTGCTCTGCAGATACTGTGGATTTCAAGCAATTTCATGCCACTTATACACTTCAAGGGAACATTGGGGATGTATTACTGGGCTGGTGTGGCGTTGGCATATATTTTTGTAATGATAAGGTGCATAAGGTGTGCACTTCTGGGTACATTTGTGAGTATCCCTGTACTTAGTGAATCAGCTTTCCTTCATTCTCTATTCAGTTTAGGAGGATTTCAACGGCCATTTTAG 1854 0.4795 MTSGTRLPTWKERENNKRRERRRRAIAAKIFSGLRMYGNFKLPKHCDNNEVLKALCNEAGWTVEPDGTTYRKGCKPLERMDIVGGSSAASPCSSYHPSPCASYNPSPGSSSFPSPSSSPYTQIPNADGNSLIPWLKNLSTASSSASSPKLPHLYLHSGSISAPVTPPLSSPTARTPRINVEWDDQSARPGWTRQQHYSFLPSSSPPSPGRQVVDPEWFAGIKLPHVSPTSPTFSLVSSNPFAFKEDGLVAGSGSRMWTPAQSGTCSPAIPPGSDHNADIPMAEAVSDEFAFGSNMLGLVKPWEGERIHEVFGSDDLELTLGNSKTSRGVAVSLSSASVTLWHRREKMAPQLAATHSSLLRVPPSSASLCFRRNKDLIPERCTIINRKKNHAITAFAGNSLGKSAIQLNAVSSPLFTDKEAHLSLRLPMSRRCNTTIRQAFIYHSSGFRIPANAEKPEWWWRTLSCVPYLLALQISAAGIYLEPILEKFPLFQSLIFYIPGAVNRLPNWFPMLYCYVAIVWVVKNKDLPLILRFHVMMGMLLELALQILWISSNFMPLIHFKGTLGMYYWAGVALAYIFVMIRCIRCALLGTFVSIPVLSESAFLHSLFSLGGFQRPF 617
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo4g03326 617 MobiDBLite consensus disorder prediction 1 21 - -
Pumo4g03326 617 Pfam Chloroplast import apparatus Tic20-like 427 602 IPR005691 -
Pumo4g03326 617 MobiDBLite consensus disorder prediction 103 123 - -
Pumo4g03326 617 Pfam BES1/BZR1 plant transcription factor, N-terminal 3 139 IPR008540 -
Pumo4g03326 617 PANTHER BES1/BZR1 HOMOLOG PROTEIN 3-RELATED 1 326 IPR033264 GO:0003700|GO:0006351|GO:0009742
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo4g03326 Pumo-Chr4 70296414 70309430 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo4g03326 1 325 BZR Transcription Factor Family AT1G78700 70.359 4.90e-135 395
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF BES1 Pumo4g03326 TIC20 4.3e-73 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo4g03326 - - gmx:100795369 578.17