Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo4g03324 ATGCGGTTTGTGATGTCTTCAAGCTCCAAACATGTGTCTATGTTCTTCATTTTTTTGTTCCTGGCTTTCCCACACTTTGGATCCAACGCTCAACTCTTACCACAAGATGAAGTTAAATTGCTACAAGCAATATCAGACAAGGTAGAGAACTTGAATTGGAAAGTTACACAACGTTCCTGCAACAACAGGGATAAGGGATTTGATAACAGGAAAATTTCAAGGGATGTGAATCAAATCATAAGAAATGTCACGTGTGATTGCACTTTCAACAAGAACACTACTTGCCATGTGATATCAATTGCCCTCAAGGGTATCAATATATCTGGACCTATTCCCGATGAATTTGGAAATCTAACTCGACTGAAAATACTTGATCTCACTCGGAATAATTTCAATGGCTCAATTCCAAAAAGCCTTGGACGCCTCTCATCAGTTGTCATTCTGTCACTTTTGGGAAATCGACTTACTGGTTCAATTCCCTCAGAAATTGGTGATATGGCTAGTCTGGAAGAACTGAACTTGGAAGATAATCAACTTGAAGGACCTCTTCCCCCGAGCCTTGGAAAAATGAGCAACTTGCTGAGATTACTTCTTTCTACAAATAATTTCACTGGGACAATACCAGAAACATATGGAAATCTAAAGAATCTCACTCAGTTTAGGATAGATGGGAGCAGTTTATCTGGGAAGATACCCAGTTTTATTGGGAACTGGACCAACCTTGATAGATTGGATTTGCAGGGCACATCCTTGGAAGGCCCAATTCCTTCTGTAATATCTAACTTGACAAATTTGACAGATTTGAGAATATCTGATTTGAAGGGACCAACTATGACATTTCCTAATCTGAAGAATTTGAAACTCATGGAAAAACTGGAATTGAGAAAGTGCTTAATCACTGGTCCCATTCCAAGCTACATTGGAGAAATGGAAAGTTTAAAAACTCTAGATCTGAGCTCCAACATGCTGACTGGTTCAATCCCAGATTCATTTCAAGACTTGGGAAAAATAAATTACTTGTTTCTGACTAACAATTCTCTAAGTGGACGAATTCCTGATTGGATACTGAGCATAAAACAGAATGTTGATTTATCTTTGAACAATTTCACAGAGACTTCTGCACCTAATTGCCAGATCTTGGATGTAAACTTAGCTTCCAGCCTCTCTCCCTCAGCAAACACTTCAATATCTTGTTTGAAGATGGGCCAACCTTGTTCAGGAAAACCCCGGTTTCATTCACTGTTCATAAACTGTGGAGGATCTGAAACAAAGTCTGAGGGCAATGAATATGAAGCTGACCTCAATCTACGTGGCATTTCAAACTTTATTCCTAGTAATAGTGGCAAATGGGCATATAGCAGCACTGGAGTATATCTAGGAAATGAAAAAGCTGATTATGTAGCAACAAATCAGTTTTCTTTGAATATTAATGGCCCTGAATACTACAAAACAGCCCGCATGGCCCCTCTTTATCTTAATTACTATGGCCTTTGTATGCTGAATGGCAATTATAAAGTGAAACTTCATTTTGCTGAGATAGCATTCTCTGCTGACCAATCATTTAGCAGCCTTGGAAAGCGTGTATTTGATGTTTCAATTCAAGGTTTTAAATATTTGAAAGATTTCAACATTGTGAAAGAAGCTGGTGGAGTTGGTAAAGGAATCACTAGGGAGTTTAATGTGAATGTTACTGACAACACTTTGGAAATCCACTTATCCTGGGCAGGGAAAGGAACTAATGCCATTCCTATAAGAGGTGTGTATGGACCTCTCATATCTGCTATCACTGTGACCCCAAACTTTAAAGTTTATAGACATGGGCTGTCTACTGGAACAATAGTTGGAATTGTGGCTGGGGCATGTGTGATTGTCATATTGATACTCTTTGCTCTTTGGAAGATGGGTTTCCTTTGTGGGAAAAAAGATCAAACAGACCAAGAACTTCTAGGTCTGAAAACAGGTTATTTCAGTTTAAGACAAATCAAATCTGCTACTAATAACTTTGACCCAGCAAATAAGATAGGTGAAGGAGGCTTTGGACCAGTATACAAGGGTGTACTGTCAGATGGTGCTGTGATTGCTGTTAAGCAGCTCTCCTCCAAATCAAAGCAAGGGAATCGCGAATTCATCAATGAAATAGGCATGATATCTGCTTTGCAGCATCCAAATCTTGTGAAACTTTATGGCTGTTGCATTGAAGGAAACCAGTTGCTGCTAGTATATGAATACATGGAGAACAATAGTCTTGCTCGTGCACTTTTTGGTAAAGAACAAGAGAGGATGCAATTGGACTGGCCCAGAAGAATGAAGATTTGTGTGGGGATTGCAAAGGGATTAGCTTATCTTCATGAGGAGTCAAGGTTGAAAATAGTACACAGGGATATTAAGGCAACCAATGTCTTACTTGATAAACATCTGAATGCCAAGATCTCTGACTTTGGTTTAGCCAAACTTGATGAAGAAGAGAATACTCATATCAGCACAAGAATAGCTGGGACAATTGGTTACATGGCTCCTGAGTATGCTATGAGGGGTTACTTGACTGACAAGGCAGATGTCTATAGCTTTGGAGTTGTAGCTTTAGAGATTGTTAGTGGAAAGAGCAACACAAATTACAGGCCAAAGGAGGAGTTTGTATATCTTTTAGATTGGGCCTATGTTCTCCAAGAGCAAGGAAACCTTCTGGAGTTGGTGGATCCAAGTCTTGGTTCAAAGTACTCCTCAGAAGAGGCCATGAGAATGCTTCAGTTAGCACTCTTGTGCACCAATCCTTCTCCCACTCTTAGACCATCTATGTCATCAGTAGTGAGCATGCTTGAGGGAAAAACTCCAATTCAAGTACCAATAATTAAACGTGGTGACAGCGTAGAAGATGTAAGATTTAAAGCCTTTGAGATGTTATCACATGACAGCCAAACTCATGTTTCTTCTGCATTCTCACAAGATAGTTTAGAGCAAAGAAGCAAATCAATGGGGGGACCATGGCATGACTCCTCCATATCTCTTCCAAGTAGAACTGATTATGCTTCGACCAACAAACTTGTTAGTAGTTCAAATGATGAGTGA 3066 0.3953 MRFVMSSSSKHVSMFFIFLFLAFPHFGSNAQLLPQDEVKLLQAISDKVENLNWKVTQRSCNNRDKGFDNRKISRDVNQIIRNVTCDCTFNKNTTCHVISIALKGINISGPIPDEFGNLTRLKILDLTRNNFNGSIPKSLGRLSSVVILSLLGNRLTGSIPSEIGDMASLEELNLEDNQLEGPLPPSLGKMSNLLRLLLSTNNFTGTIPETYGNLKNLTQFRIDGSSLSGKIPSFIGNWTNLDRLDLQGTSLEGPIPSVISNLTNLTDLRISDLKGPTMTFPNLKNLKLMEKLELRKCLITGPIPSYIGEMESLKTLDLSSNMLTGSIPDSFQDLGKINYLFLTNNSLSGRIPDWILSIKQNVDLSLNNFTETSAPNCQILDVNLASSLSPSANTSISCLKMGQPCSGKPRFHSLFINCGGSETKSEGNEYEADLNLRGISNFIPSNSGKWAYSSTGVYLGNEKADYVATNQFSLNINGPEYYKTARMAPLYLNYYGLCMLNGNYKVKLHFAEIAFSADQSFSSLGKRVFDVSIQGFKYLKDFNIVKEAGGVGKGITREFNVNVTDNTLEIHLSWAGKGTNAIPIRGVYGPLISAITVTPNFKVYRHGLSTGTIVGIVAGACVIVILILFALWKMGFLCGKKDQTDQELLGLKTGYFSLRQIKSATNNFDPANKIGEGGFGPVYKGVLSDGAVIAVKQLSSKSKQGNREFINEIGMISALQHPNLVKLYGCCIEGNQLLLVYEYMENNSLARALFGKEQERMQLDWPRRMKICVGIAKGLAYLHEESRLKIVHRDIKATNVLLDKHLNAKISDFGLAKLDEEENTHISTRIAGTIGYMAPEYAMRGYLTDKADVYSFGVVALEIVSGKSNTNYRPKEEFVYLLDWAYVLQEQGNLLELVDPSLGSKYSSEEAMRMLQLALLCTNPSPTLRPSMSSVVSMLEGKTPIQVPIIKRGDSVEDVRFKAFEMLSHDSQTHVSSAFSQDSLEQRSKSMGGPWHDSSISLPSRTDYASTNKLVSSSNDE 1021
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo4g03324 1021 Gene3D - 414 600 - -
Pumo4g03324 1021 Pfam Leucine rich repeat 290 347 IPR001611 GO:0005515
Pumo4g03324 1021 Pfam Leucine rich repeat 120 179 IPR001611 GO:0005515
Pumo4g03324 1021 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 21 971 - -
Pumo4g03324 1021 Pfam Malectin domain 414 595 IPR021720 -
Pumo4g03324 1021 FunFam Probable LRR receptor-like serine/threonine-protein kinase At1g53440 275 398 - -
Pumo4g03324 1021 Gene3D Ribonuclease Inhibitor 209 413 IPR032675 -
Pumo4g03324 1021 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 411 600 - -
Pumo4g03324 1021 FunFam Putative LRR receptor-like serine/threonine-protein kinase 744 951 - -
Pumo4g03324 1021 MobiDBLite consensus disorder prediction 975 1021 - -
Pumo4g03324 1021 Gene3D Transferase(Phosphotransferase) domain 1 744 948 - -
Pumo4g03324 1021 FunFam Probable LRR receptor-like serine/threonine-protein kinase At1g53420 34 274 - -
Pumo4g03324 1021 SUPERFAMILY Protein kinase-like (PK-like) 651 940 IPR011009 -
Pumo4g03324 1021 FunFam probable LRR receptor-like serine/threonine-protein kinase At1g53430 639 743 - -
Pumo4g03324 1021 CDD STKc_IRAK 674 941 - -
Pumo4g03324 1021 Gene3D Phosphorylase Kinase; domain 1 637 743 - -
Pumo4g03324 1021 ProSiteProfiles Protein kinase domain profile. 668 950 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo4g03324 1021 ProSitePatterns Serine/Threonine protein kinases active-site signature. 790 802 IPR008271 GO:0004672|GO:0006468
Pumo4g03324 1021 Gene3D Ribonuclease Inhibitor 51 208 IPR032675 -
Pumo4g03324 1021 SMART LRR_typ_2 166 190 IPR003591 -
Pumo4g03324 1021 SMART LRR_typ_2 310 333 IPR003591 -
Pumo4g03324 1021 SMART LRR_typ_2 118 142 IPR003591 -
Pumo4g03324 1021 SMART serkin_6 668 937 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo4g03324 1021 SUPERFAMILY L domain-like 83 400 - -
Pumo4g03324 1021 Pfam Protein tyrosine and serine/threonine kinase 672 939 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo4g03324 Pumo-Chr4 70270993 70282325 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo4g03324 15 1005 Receptor kinase-like Gene Family AT1G53440 62.375 0.0 1231
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pumo4g03324 PK_Tyr_Ser-Thr 9.7e-51 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo4g03324 - - gmx:121173337 1805.03