Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo4g03318 ATGGTTAGTGGATATATGGCTCCGGAATATGCAATGCATGGTTATTTGACTGAAAAAGCAGATGTCTATAGTTTTGGAATTGTTGCCTTAGAAATTGTTAGTGGAAAGAATAACACCATTCACCGATCAAGGGAAGAAACACTGTGTCTTCTTGATTTGCACCAACCAATCCAAAATCTAAAATTAAGCTTAAAAAAAGAACAAATAAAAGAAATGGAAAAAGGTGGGGTTGCAATCTTTGGGTTGCCATCGCCACTTCGTGTAAAAGGTATCAAGCCTCCCTTCTCGGAGCAACGAAAACCTCTTCTTGTTCACCAATTTGACTTGGCGAACCACGAGACAACCCACGAATTTGACTTGGTGGCTATGATGGTGATCACGCATTTTGCAGAGGTGAGACCCTTTGCACTGAATGGAAGCCTTGGTCCTGAGGGTTGA 438 0.4155 MVSGYMAPEYAMHGYLTEKADVYSFGIVALEIVSGKNNTIHRSREETLCLLDLHQPIQNLKLSLKKEQIKEMEKGGVAIFGLPSPLRVKGIKPPFSEQRKPLLVHQFDLANHETTHEFDLVAMMVITHFAEVRPFALNGSLGPEG 145
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo4g03318 145 Gene3D Transferase(Phosphotransferase) domain 1 2 112 - -
Pumo4g03318 145 SUPERFAMILY Protein kinase-like (PK-like) 4 51 IPR011009 -
Pumo4g03318 145 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 4 60 - -
Pumo4g03318 145 Pfam Protein tyrosine and serine/threonine kinase 5 48 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo4g03318 Pumo-Chr4 70054858 70063774 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo4g03318 4 96 Receptor kinase-like Gene Family AT1G53440 46.667 2.20e-19 81.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pumo4g03318 PK_Tyr_Ser-Thr 3.2e-07 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo4g03318 - - gmx:100305430 90.8929