Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo4g03317 ATGCAAGGAGATAGGGTATTGAAGGATTTTAATATTGCAAATGAAGCAGGAGGAGTTGGAAAGAATATTACAAGAACATTTCGTGCTCTTGTGAGTAATAACTCTTTAGAAATCAGGTTTTATTGGGCTGGAAAAGGAACAACTGCTATCCCATATAGATCAGTATATGGCCCTCTTATATCAGCTATATCTGTCACTCGTGACTCTACAGGTGGCAGCATGTCTGCAGGGGTTGTAGTAGGAATAGTAGTTGCTGCAATTGTTCTTGTCATCCTAATTGTACTTTGCTGGAGAGTTTATATTGGGAAAAGAAATTCATTAGCAAAAGATGGCATGATAATAGCTGTCAAGATGCTTTCGTCTAAGTCAAAGCAAGGAAACCGTGAGTTTGTAAATGAAATAGGCATGATTTCGGCTTTGCAACACCCTTGTCTTGTTAAGCTATATGGTTGTTGTGTTGAGGGAGATCAATTGTTGCTAGCACATTTATTGAAAGAGAAAGGTAACCTAATAGAGCTAGTTGATAGAAGGCTAGGTTCAAATTTTAATGAAGATGAGGTAATGATGATGATCAAAGTGGCTCTCCTATGCACCAATGCCACTTCAAACCTTAGGCCCACCATGTCATCGGTGCTTAGCATGCTTGAAGGAAGAACTACGATTCCAGAATTTATTTCAGATCCAAGTGAGAAAATGGATGAAATGAAGTTAGAGGAAATGCGACAATATTACTTTCAGGTAGAAGAAAATGAGAGAAGTGAGACACAAGCGCAAAGTCATAGTTTATCAATTGATGGGCCATGGACTACTACATCTTCATCAGCTGTAGACCTATATCCTGTCCACATTGATTCTTCATATTGGGAGAAAAGAAATTAG 879 0.3845 MQGDRVLKDFNIANEAGGVGKNITRTFRALVSNNSLEIRFYWAGKGTTAIPYRSVYGPLISAISVTRDSTGGSMSAGVVVGIVVAAIVLVILIVLCWRVYIGKRNSLAKDGMIIAVKMLSSKSKQGNREFVNEIGMISALQHPCLVKLYGCCVEGDQLLLAHLLKEKGNLIELVDRRLGSNFNEDEVMMMIKVALLCTNATSNLRPTMSSVLSMLEGRTTIPEFISDPSEKMDEMKLEEMRQYYFQVEENERSETQAQSHSLSIDGPWTTTSSSAVDLYPVHIDSSYWEKRN 292
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo4g03317 292 Pfam Malectin domain 1 63 IPR021720 -
Pumo4g03317 292 Gene3D - 1 70 - -
Pumo4g03317 292 Pfam Protein tyrosine and serine/threonine kinase 99 193 IPR001245 GO:0004672|GO:0006468
Pumo4g03317 292 Gene3D Phosphorylase Kinase; domain 1 96 162 - -
Pumo4g03317 292 SUPERFAMILY Protein kinase-like (PK-like) 98 190 IPR011009 -
Pumo4g03317 292 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 107 160 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo4g03317 Pumo-Chr4 69974325 70006937 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo4g03317 161 274 Receptor kinase-like Gene Family AT1G53440 40.000 3.85e-19 85.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pumo4g03317 PK_Tyr_Ser-Thr 2.9e-10 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo4g03317 - - gmx:100785451 238.039