Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo4g03314 ATGATATTGATGTCTAATTTTTGTTTAATTTACGAAGGTAATGGAGAATCTCGTTTAAAATTGGGTTGGCCAACAAGGTACAAGATTTGTATTGATATTGCTAGAGGTTTGGCTTTCCTACACGAAGAATCAAGATTAAAAATTGTTCACAGGGACATTAAGGCCACTAATGTGTTGCTAGACAAAGACTTAAACCCAAAGATATCTGATTTTGGTCTAGCTAAGCTTGACGAGGAGAACAATACTCATCATAAGCATAAGAATAGCCGGGACTTATGGATATATGGCTCCAGAGTATGCAATGCATGGTTATTTGACTGA 321 0.3614 MILMSNFCLIYEGNGESRLKLGWPTRYKICIDIARGLAFLHEESRLKIVHRDIKATNVLLDKDLNPKISDFGLAKLDEENNTHHKHKNSRDLWIYGSRVCNAWLFD 106
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo4g03314 106 SUPERFAMILY Protein kinase-like (PK-like) 18 85 IPR011009 -
Pumo4g03314 106 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 16 86 - -
Pumo4g03314 106 Gene3D Transferase(Phosphotransferase) domain 1 5 97 - -
Pumo4g03314 106 FunFam Os07g0541700 protein 5 92 - -
Pumo4g03314 106 Pfam Protein tyrosine and serine/threonine kinase 20 89 IPR001245 GO:0004672|GO:0006468
Pumo4g03314 106 ProSiteProfiles Protein kinase domain profile. 1 106 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo4g03314 106 ProSitePatterns Serine/Threonine protein kinases active-site signature. 48 60 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo4g03314 Pumo-Chr4 69855582 69856070 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo4g03314 13 83 Receptor kinase-like Gene Family AT1G53420 81.690 1.41e-35 125
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pumo4g03314 PK_Tyr_Ser-Thr 1.3e-14 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo4g03314 - - gmx:100785451 136.346