Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo4g03299 ATGGATTCCTTAATAAGTATACTTTTCCTCTTATTGGCATGCACCATTATACACGTTCTCTCGAGTAAAACAATAAGGAGAAAACGAAACTACAAGCTTCCACCAGGACCTTCTGCTCTTACCCTAGTGGGAAACCTAGTTGAACTTGGCAAAAGACCACAACAAACATTGGCGAAACTTGCTAAGTTTCATGGCCCCATAATGCGTTTGAAGCTAGGTCAATTAACCACCATAGTTATCTCTTCACCAGACATGGCCAAAGAGGTGCTCCAAACCCATGACTTGTTATTCTCAAACCGAACAATTCCACATGCCACAACAGTTCACAACCACCACCATTATAGCATACCCTTCCTCCCCGTTTCACCTCTTTGGCGAGACCTCAGGAAAATATGCAATAACCAATTGCTCTCCCACAAATCCCTTGATGCAAGCCAAAGCCTTAGACGCAAAAAACTCCATGAACTCCTCAATGATGTGCACACAAGCAGCCTCAGTGGTGAAGCGGTGGATATTGGAACTGTGGTTTTTAGGAGCATAATTAATTTTTTGTCAAACACTTTTTTCTCTTTGGATTTTGTTAACTCTGTAGGTGAAACTGAAGAGTACAAGGGCATAGTGGAGAATCTTGTGAGTGTAGTTGGAACGCCAAACTTGGTGGATTTTTTCCCTTTGCTGAAGATGGTTGATCCACAAGGCATTAGAAGGCGCTCATCTACTTACATTTCCAAGTTGTTCGTTATTTTTGACCGCTTGATTGACAAACGATTGGAGTTTGGAGATGGCACAAATAATGATGACATGTTAGACACCTTGCTCAACATTTCTCGAGAGGATGGCCAAGAGATGGACAACACAAAGATTAAGCATTTATTCCTTGATCTTATTGTTGCTGGAACTGATACAACTTCCTACACAATGGAATGGGCAATGGCTGAGCTAATCAACCACCCGAAGATAATGTCAAAAGCCAAAAGGGAGCTTGAGCAAACCATTGGAATAGGCAACCCTATTGAGGAATCAGACATTGCAAGACTCCCATATTTACGTGCAATAATAAAAGAGACCTTGCGCATGCACCCAGGTGCCCCACTTTTGCTGCCTAGAAAAGCCAACATAGATGTGGAGATCAATGGCTACACTATCCCACAGGGTGCACAAATAGTAATTAATGAATGGGCTATTGGAAGAAACCCAAGCATATGGGATAATCCTAATTCATTTTCACCCGATAGATTTTTGGAGTCAGAAATTGATGTCAAGGGTCGACATTTTCAACTCACACCATTTGGTGGAGGGCGACGAATATGCCCTGGCTTGCCATTAGCTATGAGGATGTTGCATTTGATGTTGGGATCACTAATCAACTCTTTTGATTGGAAATTTGAAAATGGTGTGAACCCAGATATCGACATAGGTCAACCCATGCGAGCTATTCCATTTAGAATAAGCATGTAA 1458 0.4191 MDSLISILFLLLACTIIHVLSSKTIRRKRNYKLPPGPSALTLVGNLVELGKRPQQTLAKLAKFHGPIMRLKLGQLTTIVISSPDMAKEVLQTHDLLFSNRTIPHATTVHNHHHYSIPFLPVSPLWRDLRKICNNQLLSHKSLDASQSLRRKKLHELLNDVHTSSLSGEAVDIGTVVFRSIINFLSNTFFSLDFVNSVGETEEYKGIVENLVSVVGTPNLVDFFPLLKMVDPQGIRRRSSTYISKLFVIFDRLIDKRLEFGDGTNNDDMLDTLLNISREDGQEMDNTKIKHLFLDLIVAGTDTTSYTMEWAMAELINHPKIMSKAKRELEQTIGIGNPIEESDIARLPYLRAIIKETLRMHPGAPLLLPRKANIDVEINGYTIPQGAQIVINEWAIGRNPSIWDNPNSFSPDRFLESEIDVKGRHFQLTPFGGGRRICPGLPLAMRMLHLMLGSLINSFDWKFENGVNPDIDIGQPMRAIPFRISM 485
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo4g03299 485 PRINTS E-class P450 group I signature 350 368 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo4g03299 485 PRINTS E-class P450 group I signature 85 106 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo4g03299 485 PRINTS E-class P450 group I signature 391 415 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo4g03299 485 PRINTS E-class P450 group I signature 61 80 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo4g03299 485 PRINTS E-class P450 group I signature 287 304 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo4g03299 485 PRINTS E-class P450 group I signature 427 437 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo4g03299 485 PRINTS E-class P450 group I signature 437 460 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo4g03299 485 PRINTS E-class P450 group I signature 307 333 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo4g03299 485 PANTHER CYTOCHROME P450, FAMILY 76, SUBFAMILY C, POLYPEPTIDE 5-RELATED 8 472 - -
Pumo4g03299 485 FunFam Cytochrome P450 76C4 25 480 - -
Pumo4g03299 485 Gene3D Cytochrome P450 18 478 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo4g03299 485 Pfam Cytochrome P450 34 471 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo4g03299 485 SUPERFAMILY Cytochrome P450 34 472 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo4g03299 485 CDD CYP76-like 61 480 - -
Pumo4g03299 485 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 430 439 IPR017972 GO:0005506|GO:0016705
Pumo4g03299 485 PRINTS P450 superfamily signature 298 315 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo4g03299 485 PRINTS P450 superfamily signature 437 448 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo4g03299 485 PRINTS P450 superfamily signature 428 437 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo4g03299 485 PRINTS P450 superfamily signature 351 362 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo4g03299 Pumo-Chr4 69352453 69445949 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo4g03299 8 474 Cytochrome P450 AT2G45550 43.333 3.49e-145 424
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo4g03299 - - gmx:100792017 831.247