Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo4g03244 ATGGATTCGCAACAGCTCTTCGGTTTCGGTGGTGTTACGAGTGCAGGATTCCCCTACATGTCATCTTTTCCCACTGTTCCATCACTACCCAACAGGCTGCTTGGATCCTTGAAATATGACACAGGAAACTCACCTAATTCACCCTTCACTTATTTTGATTCTGATACTCTTTCAGCATTGAGTGACAGCCAGGAGCAATACAGCCCCGGAGAAATCCTCTCCGGTGTCAGCCCCTCTTGCAACTCTTCACTGGAAACCAACCATTACATGTATGGATCAATCTCTTCTGTGGACAGTTTCCCACTATATTCTGGTAGTAACTCTCTTCTACAGAATGTGAGTTGTAATCAGAAAATCCAACACGCTTTGTTGGAGCTAGAAACTGCTCTGATGGCCCCTGATGATGATCAAGTTACTGCACCAAATACATTCGCTGAGAGCAGCAGGCCAATGGCATCTGGCCAGAGATACAAGTCCTGGAGAAATGAGAACCATGTGTCACAATATACTCAAGGTCAGCCATCATATGTTACCGGCAGTAGTAGGCAGACAAGTGAAGTTGTGCATGTAGAGAAACGGCAAAAGTTGATGGAGGAACCAACACTACAAGCTTCCCCTCCAAACAATTTGAAGCAGTTGCTGATTGCATGTGCCAAAGCCCTGTCTGAAAACAACATGAAAGATTTTGATCAATTGGTAGGAAAGGCTAGAGATGCTGTGTCCATCAATGGGGAGCCAATCCAGCGGCTTGGTGCTTACATGGTAGAAGGGCTTGTCGCAAGGATGGAAGCATCGGGGAATAGCATCTATCATGCCCTCAGGTGCAGAGAGCCTGAAGGTGAAGAGTTACTCTCTTACATGCAACTGCTGTTTGAGATCTGCCCCTACTTAAAATTTGGTTACATGGCTGCCAATGGAGCCATTGCGGAAGCATGCAGAAACGAGGACCGCATACACATCATAGACTTCCAAATTGCTCAGGGAACTCAATGGATGACTCTTCTTCAAGCCCTTGCAGCAAGACCCGGCGGTGCTCCCCATGTTCGGATAACGGGGATTGATGATCCTGTTTCCAAATATGCTCGTGGCGACGGACTAGAGATTGTCGGGAAAAGGTTGGCCTCGATGTCTGAGAAATTTGGCATCCCAGTTGAGTTTCATGGAGTGCCTGTTTTTGCTCCAGATGTGACAAGGGAAATGCTTGATATCAGGCCTGGAGAGGCCTTGGCTGTGAACTTTCCCTTGCAACTCCATCACACAGCTGATGAGAGTGTTCATGTGAGTAACCCAAGGGATGGACTTTTGAGATTGGTAAGGTCACTTTCTCCCAAGGTGACCACACTGGTGGAGCAGGAATCAAACACAAACACAACCCCTTTCTTCAACAGGTTTATTGAAACCTTGGATTACTACTTGGCAATCTTTGAGTCCATTGATGTCAGCCTCCCAAGAGATAGCAAGGAGAGGATTAATGTGGAGCAACATTGTTTGGCCAGGGATATTGTGAACATCATTGCTTGTGAAGGCAAGGAAAGGGTTGAGAGACATGAACTATTCGGCAAGTGGAAGTCAAGGTTAACAATGGCTGGCTTTCGTCAGTGTCCTTTGAGCTCTTATGTGAATTCTGTCATAAGAAGCCTTCTGAGGTGCTATTCAGAGCATTATACACTAGTGGAGAAGGATGGAGCCATGTTGTTGGGGTGGAAGGACAGAAATTTGATATCAGCTTCAGCCTGGCATTGCTAA 1746 0.4645 MDSQQLFGFGGVTSAGFPYMSSFPTVPSLPNRLLGSLKYDTGNSPNSPFTYFDSDTLSALSDSQEQYSPGEILSGVSPSCNSSLETNHYMYGSISSVDSFPLYSGSNSLLQNVSCNQKIQHALLELETALMAPDDDQVTAPNTFAESSRPMASGQRYKSWRNENHVSQYTQGQPSYVTGSSRQTSEVVHVEKRQKLMEEPTLQASPPNNLKQLLIACAKALSENNMKDFDQLVGKARDAVSINGEPIQRLGAYMVEGLVARMEASGNSIYHALRCREPEGEELLSYMQLLFEICPYLKFGYMAANGAIAEACRNEDRIHIIDFQIAQGTQWMTLLQALAARPGGAPHVRITGIDDPVSKYARGDGLEIVGKRLASMSEKFGIPVEFHGVPVFAPDVTREMLDIRPGEALAVNFPLQLHHTADESVHVSNPRDGLLRLVRSLSPKVTTLVEQESNTNTTPFFNRFIETLDYYLAIFESIDVSLPRDSKERINVEQHCLARDIVNIIACEGKERVERHELFGKWKSRLTMAGFRQCPLSSYVNSVIRSLLRCYSEHYTLVEKDGAMLLGWKDRNLISASAWHC 581
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo4g03244 581 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 170 576 IPR005202 -
Pumo4g03244 581 ProSiteProfiles GRAS family profile. 201 580 IPR005202 -
Pumo4g03244 581 Pfam GRAS domain family 210 579 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo4g03244 Pumo-Chr4 66787490 66791022 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo4g03244 119 579 GRAS Transcription Factor Family AT5G48150 54.741 8.83e-175 502
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Pumo4g03244 GRAS 3.9e-131 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo4g03244 - - gmx:100799073 1048.11