Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo4g03218 ATGGCGGCTTCTAGGATCACGCACCACCTCATTGGCCACCGCAACATCGTCAAGCTCAAGGGTGCTTACAAGAACTGTCACTCCATCAACCTCGTCATGGAGCTCTGCGCTCGTGGCAAGCTCATCGATCGGATCATCGCCAAGGGTCACTACTCCGAATGTGCCGCCACTGCCTCTGCCACCAGATCGTCACAGTGGTACACGATGGAAATGATGCATAGGGATCTCAAGCCAGAGAAATTTCTGTTCCTCAGCAATGACGAGAACTCACTGCTTAAGGCTACAGATTTCGGTCTCTTTGTGTTCTTCAAGCTAGTTTAG 321 0.514 MAASRITHHLIGHRNIVKLKGAYKNCHSINLVMELCARGKLIDRIIAKGHYSECAATASATRSSQWYTMEMMHRDLKPEKFLFLSNDENSLLKATDFGLFVFFKLV 106
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo4g03218 106 PANTHER SERINE/THREONINE-PROTEIN KINASE 5 102 - -
Pumo4g03218 106 Pfam Protein kinase domain 9 99 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo4g03218 106 ProSiteProfiles Protein kinase domain profile. 1 106 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo4g03218 106 Gene3D Transferase(Phosphotransferase) domain 1 5 100 - -
Pumo4g03218 106 SUPERFAMILY Protein kinase-like (PK-like) 7 103 IPR011009 -
Pumo4g03218 106 Gene3D Phosphorylase Kinase; domain 1 18 35 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo4g03218 Pumo-Chr4 66278176 66278687 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo4g03218 5 104 EF-hand Containing Proteins AT4G23650 64.762 6.02e-38 131
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Pumo4g03218 Pkinase 6.3e-14 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo4g03218 K13412 - gmx:100817321 135.961