Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo4g03215 ATGTTCGTATGCTGCAGAAAGGACCCCAAAGTGAAGGCAAAGATCGCAAAGAAAACCAAGTACCCACCTCGTCGCAACGGAGACCTAACCATAGCATACGACGTGCTTCAAGCGTTCCAGAACAACTACTACGCCCAAGTGACAATAGACAACAACCACCCATTGGGTCGTCTTGATCACTGGAACTTAACATGGGAATGGCAAAAGGGAGAGTTCATATACTCCATGAAAGGAGCCTATGCTCGCAGAAAGGACCCTTCTGAGTGCTTGTATGGCCTTGCAGGAAAGTTCTACAAAGACATGGATTTCTCACAGGTTGCCACGTGTCAGAAGAAGCCAACACTCTCCGATCTTCCAGCAGAGAGAGCAGAAGATGAGAAGGTTGGGAAGCTCCCTTGGTGTTGCAGAAATGGCACTGTTTTGCCTCCACTCATGGACAAGAACAAGGCTAGGTCACTTTTCCAGGTGCAAGTGTTCAAAATGCCACCAGACACTGATAACAGAACTTCTATTACTCCCCCTATAAAGTGGAACATTGATGGTGTCATTAACCCACAATACAAGTGCAGTGCCCCAGTTAGGGTTGACCCTCAAGTTTTCCCTGACCCTAGTGGGCTTAGGGCTATTACCACAGCTGTGGCAAGTTGGCAAATAGTTTGCAACATCACCAAGCCCAAGCCCGAGCAAACCCGTTGCTGTGTCTCATTCTCAGCATTCTACAACGAATCAGCAATCCCTTGCAACACGTGTGCATGTGGCTGTGATGACACGAGAAAGTGCAACTCCAAAGCTTCACCGTTGCTTCTTCCACCAGAGGCTCTTCTTGTGCCCTTTGTTAACAGGACCATTAAGGCACGTGCATGGGCCAAGCTCAACCACTTGCACGTGCCTAGCAGGCTCCCTTGTGGGGACAACTGCCCCGTCAGCATCAACTGGCACGTGAGTTCTGATCACAAGGATGGATGGACGGCTAGGATCACGCTTTTCAACTGGGAGGACTATTCCTTTGATGATTGGTTCACTGCCATTCAGCTGAAGAGGACTTTTGAGGATTTTCGAGATGTTTATTCCTTCAATGGGACGAGAATTCCAGGTCTCAAAACTGTTTTCTTTGAAGGGCTAAAGGGTTTGAACTACTTGGCTGGAGAAACCAATGGAACACACCGTAGAGACCCTAGGGTTCCAGGGAAACAACAATCTGTGATCTCTTTCAGCAAGAAGCACGTAAAAGACTTTGATGTCACACATGATGGGTTCCCCACTAAGGTTTTCTTCAATGGAATGGAGTGTTCACTTCCTCCAATTAGACCTGCCAAAAGTTCAGGGCACAAATCTTCCATCAGTAGTGTCCTTGCACTCATTTTCACAGCTTTTGTGACTTTCTTGATGATCTAA 1395 0.4746 MFVCCRKDPKVKAKIAKKTKYPPRRNGDLTIAYDVLQAFQNNYYAQVTIDNNHPLGRLDHWNLTWEWQKGEFIYSMKGAYARRKDPSECLYGLAGKFYKDMDFSQVATCQKKPTLSDLPAERAEDEKVGKLPWCCRNGTVLPPLMDKNKARSLFQVQVFKMPPDTDNRTSITPPIKWNIDGVINPQYKCSAPVRVDPQVFPDPSGLRAITTAVASWQIVCNITKPKPEQTRCCVSFSAFYNESAIPCNTCACGCDDTRKCNSKASPLLLPPEALLVPFVNRTIKARAWAKLNHLHVPSRLPCGDNCPVSINWHVSSDHKDGWTARITLFNWEDYSFDDWFTAIQLKRTFEDFRDVYSFNGTRIPGLKTVFFEGLKGLNYLAGETNGTHRRDPRVPGKQQSVISFSKKHVKDFDVTHDGFPTKVFFNGMECSLPPIRPAKSSGHKSSISSVLALIFTAFVTFLMI 464
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo4g03215 464 PIRSF COBRA 4 464 IPR006918 GO:0010215|GO:0016020
Pumo4g03215 464 Pfam COBRA-like protein 43 223 IPR006918 GO:0010215|GO:0016020
Pumo4g03215 464 PANTHER COBRA-LIKE PROTEIN 7 1 463 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo4g03215 Pumo-Chr4 66233401 66238736 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo4g03215 1 464 COBRA Gene Family AT3G20580 63.539 0.0 624
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo4g03215 - - gmx:100789175 894.419