Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo4g03213 ATGGCTACCATCATTTTAAGGTCTAATGAAGTATTTCATGCCTTGGGCTTGTTCTGTATCTTGTTGATGGTGCATAAGGGTGATGCCTATGATTTCGTAGTTGGAGGGCAAAAGGGTTGGAGTGTCCCAAGTGACCCCAATTCCAACCCTTACATTCAATGGGCACAAAAGAGCCGATTTCAAGTAGGAGACTCCCTAGTGTTCAATTACCCTTCTGGCCAAGACTCAGTGATTCAAGTAAGTAGCCAAGACTATGGCAGTTGCAACACTGATGCATACACTGAAAAATTCTCTGATGGCCACACAGTCATCAAGCTCAACCAATCAGGGCCTCACTTCTTCATCAGTGGAAACAAAAACAGCTGTCTAAAAAATGAGAAGCTGGTGGTGATTGTGCTGGCAGACAGGAACAATAAAAACACCAACCAAACAAGCCCTCCCTCTCCTAATTCTCCTTCTCCTTCTCCTTCATTTTCAATAGAGTCATTAGCTCCTTCACCAGCACCTTCTCAGCAAGTGGTTCCACCTCCACCATCTCCAGTGGCAGCACCTCCTCAGCAAGAGACTCCTTCTCCACCATCTCCAGCTCCTGTTAGTGACCAACCTTCTCCTCCTTCTCCTCCTCATAATGCTGCTTCTTCAATCTTGGTCAGCTTTGCTGGTTCTATTGGAGCATTCATGGCCTCAGTTCTGTTTTTTTCTTTCTAA 708 0.4548 MATIILRSNEVFHALGLFCILLMVHKGDAYDFVVGGQKGWSVPSDPNSNPYIQWAQKSRFQVGDSLVFNYPSGQDSVIQVSSQDYGSCNTDAYTEKFSDGHTVIKLNQSGPHFFISGNKNSCLKNEKLVVIVLADRNNKNTNQTSPPSPNSPSPSPSFSIESLAPSPAPSQQVVPPPPSPVAAPPQQETPSPPSPAPVSDQPSPPSPPHNAASSILVSFAGSIGAFMASVLFFSF 235
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo4g03213 235 CDD OsENODL1_like 30 133 IPR041846 -
Pumo4g03213 235 Gene3D - 30 145 IPR008972 -
Pumo4g03213 235 MobiDBLite consensus disorder prediction 138 212 - -
Pumo4g03213 235 FunFam Early nodulin-like protein 9 30 144 - -
Pumo4g03213 235 PANTHER BLUE COPPER PROTEIN 30 161 IPR039391 GO:0009055
Pumo4g03213 235 MobiDBLite consensus disorder prediction 169 209 - -
Pumo4g03213 235 ProSiteProfiles Phytocyanin domain profile. 30 134 IPR003245 GO:0009055
Pumo4g03213 235 Pfam Plastocyanin-like domain 40 124 IPR003245 GO:0009055
Pumo4g03213 235 SUPERFAMILY Cupredoxins 29 133 IPR008972 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo4g03213 Pumo-Chr4 66219428 66222505 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo4g03213 11 170 Phytocyanin Superfamily AT3G20570 51.497 8.30e-52 165
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo4g03213 - - gmx:100788637 303.908
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo4g03213 4 66219428 66222505 Pumo4g03213 4 66219428 66222505 ECH