Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo4g03210 ATGGCCATGGGTGATGAAGGAATGCACGACAGTCAGATAGTAGATAATCTCGACATGATTTACAAGAATGATACCTCACAAAATAATAATGGCAGTGGATTCTCGGCATTTTCTTCTGAACAGTCTGCAGATGCTAATGCTACTTTATGGGACTCTAGTTCCACAGACATGATTTTGAGTACTGGACTCAACATGCAACGAGCCAGTGACCTTCTTTTTGGGTTCTCAATATATACTGAGCCAATCAAAACTGAAATCATCGAGCATGCACGTTCAGCTATGGATGAGTTGTTAAAGATAGGCACTGCAGGGCATCCCTTATGGCAGCCCCAACCAAAGGATAGATATGATATTTTAAATGATATTGAATATGTGAGGCAATTTGGTCAGGTTGATACAACGCTAAGGGAGATTGTTAAGTTGGTTGAGGTTGGAGAGCCTCAAAATTTACCAAGCTTTGACACATATCAAACTGAGGAGCCAGCAACAAGGGCAACTCCAACAGTATCTCTACAAACTGAAGCTTCACGAGATATGGCATTTATTAACATGTCCCCAATCAGCATTGTTGAATTACTAATGGATGTGAATGAATGGTCGAGTGCATTTTACAATATTGTCTCAAAAGCAACAACTGTAGGAACTTTGTTAGGAGCCGAGGGAAGCTACGATGACAAGTTGCACGTGATGAGCACAGAACTTCGTTTACCTACTGCTATTGTACCGACCAGGGAGTGTTATTTTGGAAGGTACAGCAAGCAATTCTCTCATAACATATGGGGAGTCGTCGATATATCATTGGAGAAGTTTCTTCCTTCCCCAACGAGTAATTTCTTGAAAAGACCATCGGGATGTTTAATTAGTGGAATGCCTAACGGACACTCGAAGGTTGTTGTATGGGTCGAGCATGTAGAAGCAGACCATAGGCATTTGGACAATTATTTCCAGCCTCTAGTCACCTCTACTCTAGCTTTTGGTGCAACCCGTTGGCTTAATTCCTTAAATCGATATAGTGAGTGGTTACAAACTCTAAAAGCAACAACATTTGTTGCAGATGAAGGAGTTCTTATACCCCAAACTGGGAGGACAAATTTCTTGAAACTGGCGGACAGAATGATGAAAAGCTTTTGTGCAAATATCAGTGCTACCACAGACAATCCATGGGTGAACATAACTAGTTTTCCTGGCAATACAGATGTGAGATTTATGGTCAAGAATAATAATGAAGATACTGCAATGCCTCCTGGTACATCTGTGGTTTTCACTACTTCTCTTTGGCTAGAAGTCTGCCCAAATCGATTGTTCAACTTTCTTCGTCACGAGAATTCCAGAACCAAGTGGGATTTGCTTTCGCGTAGACTTGTTATTCGAGAATTCGCGTCCATGCTTAAGGGAGAAAATCCAGGGAATCGTGTTTCGTTGATGCGTGCAAATACCTCAGAGGGCAAGCTTGTGATCTTTTATCTGCAAGAGAGTTACACAGACTCAACAGGTTCCTACGTGGTGTATGCTCCACTAGACGAGTCAGCTTTCTTAGCTCTTGGAAAGGGATCCAACCCTGACAAAGTGATGATTCTACCATCAGGGTTTAGTATACTTCCTGGAAGGTTGCAAGGAGATGAAGATAGAGGCACTGGAAGTCTTCTAACTGTTGCATTCCATATAGTTGAAAGTGCCACAAGTAGGCCATTTATCCCTCCTGAATCAATCCAAACCATATACAAAGTCATTACAGACACTGTCACCTCTATAAAGGACACAGTGTTGTATCATAATCATCGCAACAATTGGATGGACAATTGA 1803 0.4165 MAMGDEGMHDSQIVDNLDMIYKNDTSQNNNGSGFSAFSSEQSADANATLWDSSSTDMILSTGLNMQRASDLLFGFSIYTEPIKTEIIEHARSAMDELLKIGTAGHPLWQPQPKDRYDILNDIEYVRQFGQVDTTLREIVKLVEVGEPQNLPSFDTYQTEEPATRATPTVSLQTEASRDMAFINMSPISIVELLMDVNEWSSAFYNIVSKATTVGTLLGAEGSYDDKLHVMSTELRLPTAIVPTRECYFGRYSKQFSHNIWGVVDISLEKFLPSPTSNFLKRPSGCLISGMPNGHSKVVVWVEHVEADHRHLDNYFQPLVTSTLAFGATRWLNSLNRYSEWLQTLKATTFVADEGVLIPQTGRTNFLKLADRMMKSFCANISATTDNPWVNITSFPGNTDVRFMVKNNNEDTAMPPGTSVVFTTSLWLEVCPNRLFNFLRHENSRTKWDLLSRRLVIREFASMLKGENPGNRVSLMRANTSEGKLVIFYLQESYTDSTGSYVVYAPLDESAFLALGKGSNPDKVMILPSGFSILPGRLQGDEDRGTGSLLTVAFHIVESATSRPFIPPESIQTIYKVITDTVTSIKDTVLYHNHRNNWMDN 600
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo4g03210 600 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 60 587 IPR042160 -
Pumo4g03210 600 ProSiteProfiles START domain profile. 79 343 IPR002913 GO:0008289
Pumo4g03210 600 SUPERFAMILY Bet v1-like 81 341 - -
Pumo4g03210 600 CDD START_ArGLABRA2_like 83 339 - -
Pumo4g03210 600 SUPERFAMILY Bet v1-like 361 555 - -
Pumo4g03210 600 Pfam START domain 150 338 IPR002913 GO:0008289
Pumo4g03210 600 SMART START_1 130 340 IPR002913 GO:0008289
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo4g03210 Pumo-Chr4 66173220 66178668 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo4g03210 65 588 Homeobox Transcription Factor Family AT4G04890 39.963 7.21e-121 373
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo4g03210 K09338 - gmx:102662817 551.592