Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo4g03209 ATGGGAACAGATAATGTTAAAGCCATAGTTCTGGATCAAAAAAAAGATATCTCCGAATGTAGGGTTGATGGATTGTCAAAAATGAAGAATCTTAGCCTACTTATATTATATCATCAAAACTTTTCTGGAGGCCTTGATTCTCTTTCCCACAAGCTGCGATATCTTTTGTGGCACGGCTATCCTTTTCCTTCTTTGCCATCAAATTTTATGGCCATTAATCTCGTGGAATTGAATATGCCTAATAGTAGCCTTGAACTTGTTTGGGAAGGTCCCAAGAAGTTCCCGTGTCTGAAAAGGATGGATTTGAGCAACTCCACAAATCTTATAGACACTCCAGATTTTTCTAGGGTCCCAAAACTTGAGCGGCTAGATCTTTCAGGATGCACAAGTTTAGTACATGTCCATCCAACAATAGGACTTCTTGAAAAACTTGCTTTCTTGAGTTTACGAAATTGTACCAATCTAGTCAGCATCAGTTTTGGCAGTGAATCTAATCTAAGTTCTCTGAGAGTTCTACATTTCTCTGGTTGCACTAAACTTGAAAAAACGCCAGATTTTACAAGTGCAACAAATCTTGAGTACCTTGACATTGATGGATGTACAAGTTTATCCTCGGTTCATGAATCTATTGGATCCCTTGTAAAGCTTACATTCTTGAGTTTGAGAGAATGCAAAAATCTTGTTAGTATACCTAACAACATCAATACCCATGATATCTCTTCAAACTTTAGATTTATGTGGTTGTTTGAAACTTACGGATCTGCGCCTAGGACAAGCTTTCAATTCTTCATCCCATTGGGAATCTTTGATTTTTCTGGACATAAGCTTTTGCAATCTACTTGA 843 0.3737 MGTDNVKAIVLDQKKDISECRVDGLSKMKNLSLLILYHQNFSGGLDSLSHKLRYLLWHGYPFPSLPSNFMAINLVELNMPNSSLELVWEGPKKFPCLKRMDLSNSTNLIDTPDFSRVPKLERLDLSGCTSLVHVHPTIGLLEKLAFLSLRNCTNLVSISFGSESNLSSLRVLHFSGCTKLEKTPDFTSATNLEYLDIDGCTSLSSVHESIGSLVKLTFLSLRECKNLVSIPNNINTHDISSNFRFMWLFETYGSAPRTSFQFFIPLGIFDFSGHKLLQST 280
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo4g03209 280 Gene3D Ribonuclease Inhibitor 164 257 IPR032675 -
Pumo4g03209 280 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 166 266 IPR044974 GO:0006952
Pumo4g03209 280 Pfam Leucine Rich Repeat 73 90 IPR011713 -
Pumo4g03209 280 Gene3D Ribonuclease Inhibitor 3 162 IPR032675 -
Pumo4g03209 280 SUPERFAMILY L domain-like 22 249 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo4g03209 Pumo-Chr4 66110048 66112204 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo4g03209 162 235 WRKY Transcription Factor Family AT4G12020 41.892 2.86e-07 49.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo4g03209 - - vra:106778604 349.747