Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo4g03188 ATGGACTCCCTCGCCGGAGCTCCGCCCCCCGCCGGCACCCCTCCACCGCCGCCGCGTCAGTCACCGTTCCCCGGCCGGGAAGACTGCTGGTCGGAGGAGGCCACGTTCACGCTCATCGAGGCATGGGGCGAACGCCACCTCGAACTCAACCGCGGCAACCTCCGGCAGCGCCACTGGCAGGAGGTCGCCGACGCCGTCAACGCCCGCCACGGCCACGTCAGCACCAAGGCCCGCCGCACCGACGTCCAGTGCAAGAACCGCATCGACACCCTCAAGAAGAAGTACAAGATCGAAAAGGCTAGGGTTTCCGATTTCGGCGATTCTGCCACCTCCTGGCCCTTCTTCCGCCGCCTCGATTTCCTCATCGGCGACAATTTCCCGGCCAAAAAACCCTCCCCGCCGCCGGCCACCCCCGCCGTCCGCCGGACCACTCCTCCTGCGAAGTCCCCGGCCTGGGCCCTCATTCCCGTCGCTCCTCGATCCGGCACCAAAAATCGGCCGGCGCCGCCGTCGCCGGAGAGCGTCGCCGATTCATGCTTCCGGCGGAATTTCTCGGTGTTCGCGGCGGCGGCTGCGGCCGCCGCCAAGGCGGACAGCGAGAATTCAAATGGTTCAAAATGGAGCGGTGAGAGTGAGAAAGAGATGATGATGATGAAGAAGAAGAAAAGAGGAAGGGATTGGGAATTTGGGTACAGAGAAGTGGCAGAGGCGTTGGAGAGGTTTGGGGAGATTTATGAGAGAGTGGAAGAAGCGAAACAGAGACAAATGATTGAGTTGGAGAAACAGAGAATGCAGTTTGCTAAGGATTTGGAAACCCAGAGAATGAAGCTCTTCATGGAAACGCAGGTTCACTTGCAAAAAATCAACCATTCCAAACGTTCCTCTGCATCTGATAGTGTCTCATAG 906 0.5993 MDSLAGAPPPAGTPPPPPRQSPFPGREDCWSEEATFTLIEAWGERHLELNRGNLRQRHWQEVADAVNARHGHVSTKARRTDVQCKNRIDTLKKKYKIEKARVSDFGDSATSWPFFRRLDFLIGDNFPAKKPSPPPATPAVRRTTPPAKSPAWALIPVAPRSGTKNRPAPPSPESVADSCFRRNFSVFAAAAAAAAKADSENSNGSKWSGESEKEMMMMKKKKRGRDWEFGYREVAEALERFGEIYERVEEAKQRQMIELEKQRMQFAKDLETQRMKLFMETQVHLQKINHSKRSSASDSVS 301
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo4g03188 301 PANTHER TRIHELIX TRANSCRIPTION FACTOR ASIL2 13 292 IPR044823 -
Pumo4g03188 301 FunFam trihelix transcription factor ASIL2 30 97 - -
Pumo4g03188 301 Coils Coil 234 265 - -
Pumo4g03188 301 MobiDBLite consensus disorder prediction 1 27 - -
Pumo4g03188 301 MobiDBLite consensus disorder prediction 129 148 - -
Pumo4g03188 301 Pfam Myb/SANT-like DNA-binding domain 27 120 IPR044822 -
Pumo4g03188 301 Gene3D - 30 97 - -
Pumo4g03188 301 MobiDBLite consensus disorder prediction 8 23 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo4g03188 Pumo-Chr4 65471033 65474911 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo4g03188 219 293 Trihelix Transcription Factor Family AT3G14180 44.156 1.39e-14 72.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Pumo4g03188 Myb_DNA-bind_4 1.7e-25 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo4g03188 - - gmx:100811154 442.965
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo4g03188 4 65471033 65474911 Pumo4g03188 4 65471033 65474911 ECH