Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo4g03166 ATGGGCATGAAGAGCACTGGGGGAGAGATTGTTCAAGTCCAAGGAGGGCACATTGTTCGGTCCACAGGTAGAAAAGATAGGCACAGCAAGGTTTACACTGCAAAGGGTCCTCGTGATCGAAGGGTGAGGCTCTCAGCACACACTGCTATTCAGTTCTATGATGTTCAAGATCGTTTAGGCTATGATAGACCAAGCAAGGCCGTGGACTGGCTCATCAAGAAGGCCAAGAATGCTATTGATAAGCTTGCTGAGCTTCCTCCATGGCACCCTACTCCTAACACTGCAGATGCTGAGAACAACAATAACAATGCAGGGTCAAGTGACATGGCCATTGCAGAACAATCAGAGTCTTCTGGTTACAATTTTCAGCTGCAAAGGCAATTAGGTGAGGACCATGATAACCACCATTCAGCTTTCATTCCCTCACCTATTGACACTGATGCAATAGCTTTCTTTCCCACAACCACTGCCACCTCCTCCATGAATTTCCAAACCTACCCTCCTGACATAATCTCAAGAACCAACAACTCCACTGAGGACCTTGGCCTTTCTCTTCACTCCTTCCAAGACCCTAGTTTGATCCATGGCCAGTCCCAAGCAGGTGCAAATCAAACACAAACACCTTCCAATGACCAAACCCTCTTCTCTGGCTCAACTCAAGTGGGGTTTGAGGCCAATTACCCCAGGATTGTGACTTGGAACAATGATGCAAGCACAGATATGAACAGAACTGGGTTCATGGTCAATTCACCAGCACTTCTAGGCCAAGGTGGTTCTGCTGCATATTCCCAAAGGGGGACCCTTCAGTCCAGTTTCTCACCATCACTTCGTCCTTGGAGTGACATTCCAATGGCTTCATCAGAACATCATAAGTCACAACAACCAATTCAACAGGCTTCCATCTTTGGCAGCAGGTTTCTGTCTGATGCATTGCCAGGGTTCTGCATTCCTGCTAGAATCCAAGGTGAGGATGAGAGCCACGGAGTCGGTGCCGACAAGCCATCGTCTTCTTCTCCTAATTCTCATCACTGA 1032 0.4787 MGMKSTGGEIVQVQGGHIVRSTGRKDRHSKVYTAKGPRDRRVRLSAHTAIQFYDVQDRLGYDRPSKAVDWLIKKAKNAIDKLAELPPWHPTPNTADAENNNNNAGSSDMAIAEQSESSGYNFQLQRQLGEDHDNHHSAFIPSPIDTDAIAFFPTTTATSSMNFQTYPPDIISRTNNSTEDLGLSLHSFQDPSLIHGQSQAGANQTQTPSNDQTLFSGSTQVGFEANYPRIVTWNNDASTDMNRTGFMVNSPALLGQGGSAAYSQRGTLQSSFSPSLRPWSDIPMASSEHHKSQQPIQQASIFGSRFLSDALPGFCIPARIQGEDESHGVGADKPSSSSPNSHH 343
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo4g03166 343 ProSiteProfiles TCP domain profile. 24 82 IPR017887 -
Pumo4g03166 343 MobiDBLite consensus disorder prediction 84 107 - -
Pumo4g03166 343 MobiDBLite consensus disorder prediction 93 107 - -
Pumo4g03166 343 Pfam TCP family transcription factor 23 126 IPR017887 -
Pumo4g03166 343 MobiDBLite consensus disorder prediction 193 212 - -
Pumo4g03166 343 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 19 273 IPR005333 GO:0003700
Pumo4g03166 343 MobiDBLite consensus disorder prediction 319 343 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo4g03166 Pumo-Chr4 65214841 65217561 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo4g03166 8 343 TCP Transcription Factor Family AT3G15030 44.500 5.69e-75 235
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Pumo4g03166 TCP 9.2e-33 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo4g03166 - - gmx:100796390 629.787
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo4g03166 4 65214841 65217561 Pumo4g03166 4 65214841 65217561 ECH