Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo4g03163 ATGGCGCAATTACCTCCGAAGATCCCAAACATGTCACCAAGTTGGCCAGACTTATCTTCTCATAATCAGAAGATGCCATTGCCACCTATCAGCAACGGCACCAACAACAACACAGGCCATCATTATCAGCACAGTCAAAACCCTTCTTGGGTGGACGAGTTTCTTGACTTCTCCTCGGCGCGGCGCGGCGCTCACCGGCGGTCGGTGAGCGATTCCATCGCCTTCTTGGAGGCGCCAATGAGGTGTGGTGAGAATCATAATAATAATAATAATAATAATAATGACAATGAGAATAATGAGTTTGACAAGTTTGATGATGAACAATTCATGTCCATGTTCACGGATGAAGTAGTGCTCTCTGGGGTCCCCATGCCACCACCAACCTTGTCCTCCTCTAACCCTTCAAGCCCTTCTGATCAGAACTTCATCAATGATGAGAGAGAGACCAGCCAGAAGGAGAAGAAGCTGCAGCAAGAGGAGCACCACCACCACCAATTGAAAAATGAAGCAGATGAGGTTGAAAGCCAATGCAAACAGGAAATTATACAGCCTCCTAATGACAACAATACTTCTTCTTCCAATGAGAGAATTACTGACCCCAAGAGAGTCAAAAGAATCTTGGCTAACAGACAATCTGCACAAAGATCGCGAGTGAGGAAGCTGCAATACATATCAGAGCTTGAGCGAAGTGTAACTTCATTACAGGCCGAAGTTTCAGTGCTGTCTCCAAGGGTTGCATTTTTAGATCATCAACGCTTGCTTCTAAATGTCGACAACAGTGCTCTCAAGCAAAGAATCGCTGCCCTTGCTCAAGACAAGATCTTTAAAGATGCTCATCAAGAGGCACTGAAGAGGGAGATAGAGAGACTAAGGCAAGTTTATCACCAACAAAGCCTCAAGAAGATGGAAAATGCTGCAGGGTCACCATTACCATCACCAAAGCCTATATGTGAGGCTCAAACAGAAAAGGAAGCACAACTTCTCAACGCTTGA 993 0.4542 MAQLPPKIPNMSPSWPDLSSHNQKMPLPPISNGTNNNTGHHYQHSQNPSWVDEFLDFSSARRGAHRRSVSDSIAFLEAPMRCGENHNNNNNNNNDNENNEFDKFDDEQFMSMFTDEVVLSGVPMPPPTLSSSNPSSPSDQNFINDERETSQKEKKLQQEEHHHHQLKNEADEVESQCKQEIIQPPNDNNTSSSNERITDPKRVKRILANRQSAQRSRVRKLQYISELERSVTSLQAEVSVLSPRVAFLDHQRLLLNVDNSALKQRIAALAQDKIFKDAHQEALKREIERLRQVYHQQSLKKMENAAGSPLPSPKPICEAQTEKEAQLLNA 330
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo4g03163 330 MobiDBLite consensus disorder prediction 179 196 - -
Pumo4g03163 330 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 204 219 IPR004827 GO:0003700|GO:0006355
Pumo4g03163 330 FunFam Basic leucine zipper 61 200 273 - -
Pumo4g03163 330 MobiDBLite consensus disorder prediction 13 46 - -
Pumo4g03163 330 MobiDBLite consensus disorder prediction 145 176 - -
Pumo4g03163 330 MobiDBLite consensus disorder prediction 1 46 - -
Pumo4g03163 330 SUPERFAMILY Leucine zipper domain 201 255 IPR046347 GO:0003700|GO:0006355
Pumo4g03163 330 CDD bZIP_plant_RF2 202 252 IPR044759 GO:0003700|GO:0006355
Pumo4g03163 330 Coils Coil 280 300 - -
Pumo4g03163 330 MobiDBLite consensus disorder prediction 81 101 - -
Pumo4g03163 330 PANTHER BASIC LEUCINE ZIPPER 34 1 309 - -
Pumo4g03163 330 MobiDBLite consensus disorder prediction 83 97 - -
Pumo4g03163 330 Gene3D - 200 272 - -
Pumo4g03163 330 MobiDBLite consensus disorder prediction 119 202 - -
Pumo4g03163 330 Coils Coil 149 183 - -
Pumo4g03163 330 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 199 251 IPR004827 GO:0003700|GO:0006355
Pumo4g03163 330 SMART brlzneu 197 261 IPR004827 GO:0003700|GO:0006355
Pumo4g03163 330 Pfam bZIP transcription factor 201 245 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo4g03163 Pumo-Chr4 65174277 65178641 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo4g03163 1 278 bZIP Transcription Factor Family AT3G58120 57.426 7.26e-98 289
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Pumo4g03163 bZIP_2 4.1e-09 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo4g03163 - - gmx:100815433 523.472
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo4g03163 4 65174277 65178641 Pumo4g03163 4 65174277 65178641 ECH