Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo4g03143 ATGCTTCAAAGTTGGACTTTCTTTCTGCTTAGGAGTCGGCCTCCATCTGCTGCACAACAATGTCTTATAGCTATTGGATTTGTTAACAGAAATCACTTTGTACAGGACATAATAGGATGGTGTTTGCTGCGATTTCTGAGGAGTCTCGACCGGGCATTAACGCCAGTGCTTGCTGCTGGGTGGTGGGTGGTGGCCAATGGATTCGGTGACGCAGTTTGCCTTGGCGAGGATCAGGCATTGACCAAAGATGGGGATGAAGGAAGGAAAGCAAGAAGCTGTCCACATAGAGCAGAATTTTCTCCTCTTGATGACAAGAGCAAGTCCTTAGTGTTGTTTTTGGAGGCTGTCACTGGAGTTATGGATGCTCATCTTCGGTATTATCAACAAGTATATGACATGGAAGCGGATTTTTTATGTCTCCGACTTGTTATTTCTTGTTTCACCCCTTTACTTTTACTGATGGAAGTGATAAGAAGAGCACCTCATGAGTTCAAGATTGCTGGTTTAGAGGGAAGAGCTTTATCACGTGCTGATCAAATAGACCAGGCTATCAACTACATCAAGAACCTTGAGACAAGGGTGAAGATGGCGCAGGAGAAGAAAGAAACCTTAATGCAAAGGAAGAGATCTCGCAGTGACAGTAGTTCCAGTGCTTCTGAAGCACCAAAAATTGAGATTCATGAAATTGGTTCCTCACTACAAATCATTCTGACGTGTGGGCTTGATAACCAGTTCATTTTGAGTGAAATTATTCGCATACTGCATGAAGAGAACATAGAGGTCAAAAGTGTCAATTCTTCACTCGCTGGAAACTCAGTGCTACATGTTGTGCACGCAGAAGGAGGAGCATTATCACGTGTTGATCGAATAGACGAGGCTATCAACTACATCAAGAACCTAGAGACAAAGGTGAAGATGGCGCAGGAGAAGAAAGAAAGCTTAATGCAAAGAAAGAGATCTCGCAGTGACAGTAGTTCCAGTACTTCTGAAGCACCAAAAATTGAGATTCATGAATTGGATTCCTCGCTACAAATAATTCTGACGTGTGGGCTTCATAACCAGTTCATTTTCAGTGAAATTATTCGCATACTGCATGAAGAGAACATAGAGGTCAAGAGTGCCCATTCTTCATCACTCACTGGAAACTCAATGTTGCATGTTGTGCACGCAGAAATTCAGCAATATTCCATTCAGCTAGGAACAACCGCAATGAGTATTGAGAGATTGAGAAGGTTTGTGGACGAACATGCAGGAAACTTTTAA 1263 0.4276 MLQSWTFFLLRSRPPSAAQQCLIAIGFVNRNHFVQDIIGWCLLRFLRSLDRALTPVLAAGWWVVANGFGDAVCLGEDQALTKDGDEGRKARSCPHRAEFSPLDDKSKSLVLFLEAVTGVMDAHLRYYQQVYDMEADFLCLRLVISCFTPLLLLMEVIRRAPHEFKIAGLEGRALSRADQIDQAINYIKNLETRVKMAQEKKETLMQRKRSRSDSSSSASEAPKIEIHEIGSSLQIILTCGLDNQFILSEIIRILHEENIEVKSVNSSLAGNSVLHVVHAEGGALSRVDRIDEAINYIKNLETKVKMAQEKKESLMQRKRSRSDSSSSTSEAPKIEIHELDSSLQIILTCGLHNQFIFSEIIRILHEENIEVKSAHSSSLTGNSMLHVVHAEIQQYSIQLGTTAMSIERLRRFVDEHAGNF 420
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo4g03143 420 Coils Coil 180 207 - -
Pumo4g03143 420 MobiDBLite consensus disorder prediction 201 221 - -
Pumo4g03143 420 MobiDBLite consensus disorder prediction 308 333 - -
Pumo4g03143 420 Coils Coil 290 317 - -
Pumo4g03143 420 PANTHER ACHAETE-SCUTE TRANSCRIPTION FACTOR-RELATED 285 410 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo4g03143 Pumo-Chr4 64605158 64619976 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo4g03143 278 414 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G20970 31.333 4.27e-12 63.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo4g03143 - - aprc:113855892 159.073