Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo4g03137 ATGGCAGATGGATTGCATTCGCAGCATCCATCGGTAGTTCAGAAGTTATCTGGACAGTCTTATCTTGTGTCCAGGCTTGCTCCTAATCACTCCAGAAACTATTCTACCACTGGTAGTTACTTCAATGGAGGCTTGCAGTCTTCGGGTTTGGTTCCAGTCACGGCGCACGCTCCGGCAGAGAAAGGGGTGTCTGGATTTTTGGTGGATTTCCTGATGGGAGGAGTGTCGGCTGCTGTGTCCAAGACGGCTGCAGCTCCGATTGAGCGAGTTAAGTTGCTCATCCAAAACCAGGATGAAATGATCAAGAGTGGTCGGTTGTCTGAACCATACAAGGGAATTGGCGATTGTTTCACTCGAACCATGAAGGATGAAGGGGTGATTGCTCTTTGGAGAGGAAACACTGCTAATGTTATCAGATACTTCCCTACTCAGGCTCTGAACTTTGCTTTTAAGGATTATTTCAAGAGGCTTTTCAACTTCAAAAAGGATAAAGATGGCTACTGGAAGTGGTTTGCTGGGAATTTAGCATCTGGTGGGGCTGCTGGGGCTTCCTCCCTCTTGTTTGTCTATTCTTTGGACTATGCCCGAACACGTTTAGCAAATGATGCAAAGGCTGCAAAGAAGGGTGGTGAGAGGCAGTTCAATGGCTTGATTGATGTTTACAGGAAAACTATTAAGTCTGATGGTGTTGCCGGTCCTTTATCGTGGTTTCAACATCTCATGTGTTGGAATCATAGTGTACCGTGGTCTTTACTTTGGAATGTATGA 768 0.4609 MADGLHSQHPSVVQKLSGQSYLVSRLAPNHSRNYSTTGSYFNGGLQSSGLVPVTAHAPAEKGVSGFLVDFLMGGVSAAVSKTAAAPIERVKLLIQNQDEMIKSGRLSEPYKGIGDCFTRTMKDEGVIALWRGNTANVIRYFPTQALNFAFKDYFKRLFNFKKDKDGYWKWFAGNLASGGAAGASSLLFVYSLDYARTRLANDAKAAKKGGERQFNGLIDVYRKTIKSDGVAGPLSWFQHLMCWNHSVPWSLLWNV 255
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo4g03137 255 SUPERFAMILY Mitochondrial carrier 64 232 IPR023395 -
Pumo4g03137 255 Gene3D Mitochondrial carrier domain 67 238 IPR023395 -
Pumo4g03137 255 PANTHER ADP,ATP CARRIER PROTEIN 1-RELATED-RELATED 59 232 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Pumo4g03137 255 PRINTS Mitochondrial carrier protein signature 69 82 IPR002067 GO:0055085
Pumo4g03137 255 PRINTS Mitochondrial carrier protein signature 132 152 IPR002067 GO:0055085
Pumo4g03137 255 PRINTS Mitochondrial carrier protein signature 82 96 IPR002067 GO:0055085
Pumo4g03137 255 PRINTS Mitochondrial carrier protein signature 184 202 IPR002067 GO:0055085
Pumo4g03137 255 Pfam Mitochondrial carrier protein 168 232 IPR018108 -
Pumo4g03137 255 Pfam Mitochondrial carrier protein 65 161 IPR018108 -
Pumo4g03137 255 ProSiteProfiles Solute carrier (Solcar) repeat profile. 64 157 IPR018108 -
Pumo4g03137 255 PRINTS Adenine nucleotide translocator signature 110 131 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Pumo4g03137 255 PRINTS Adenine nucleotide translocator signature 169 182 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Pumo4g03137 255 PRINTS Adenine nucleotide translocator signature 66 78 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Pumo4g03137 255 PRINTS Adenine nucleotide translocator signature 143 155 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo4g03137 Pumo-Chr4 64310087 64313208 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo4g03137 7 232 Antiporters AT4G28390 77.686 3.05e-125 359
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo4g03137 K05863 - gmx:100785990 447.588
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo4g03137 4 64310087 64313208 Pumo4g03137 4 64310087 64313208 ECH