Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo4g03124 ATGTTGCTGATCAAAGTGATGGAGAGCGGGTATCCAAAGGAAACTCCAATGGGAAAGGTATGGTTCAGTGACTTTTATGGTACTATATCTTATTCCCTAAGAACAAAGGAACAAGAAAAATATGTGTGCTTCAGTGCTTCCTGCATTACACATTGGATTTATAGATGGAGAAATGCCAATTGCAATGGAAAACTCCCACCAGGTTCATTGGGTTTGCCCCTTTTGGGTGAGACCCTTCAATTCTTCTCCCCTCACACTTCTTCTGATATTCATCCATTTATCAAGCAGAGAATAACCAGGTATGGACCAATCTTCAAGACCAGCTTGGTTGGACGACCAATTGTAGTGTCCACAGACCCGGATTTTAATTCCTTCATATTCAAGCAGGAGGGACAAATGTTCCAGAGCTGGTACCCAGATTCAATCACGAAGATTTTTGGGGGACAAAGTATAGGTTTCTTACACGGTTTTCTGTTCAAGTACCTTAAGAACATGGTGCTCAATGTGTTTGGTGTTGAAAGCTTGAAAATGATGCTCTCAGAGGTTGAACTGACAGCCTGCACAACATTACAACAATGGTCACGCCAGGAAACTGTTGAGTTGAATGAAGCAACAAAAAAGATGATATTTGCTTTGACTACAAAAAAACTTCTCGGTTGTGATTCGACCACGTCTTCAGAGAATTTAATGGACAATTTTAATGCATTTATACAAGGACTCTTCTCGTTCCCACTGGACATTCCAGGAACAACTCATCACAAATGTATGCAGAAGAACTTAGCAAAGAAGGAACCAATCCTCACTGAATCCATAGCTCTGGACCTCATGTTTTTGCTCCTCTTTGTAAGCTTTGAAACCACTTCTCTGACTCTCACTTATGCCATAAAATTACTCTCTGACCATCCCTTGGTGCTCAAGCAACTACAAGAAGAACATGAAGCCATCCTCAAACAACGTGAAGATCCTAACTCCGGAATCACGTGGCAAGAATACAAATCGATGACATTTACATTTCAGTTCATAAATGAAACCTTGAGACTCGCAAATATAGCTCCAGGAATCTTCCGAAAGGCACTGAGGGATATTAATTTTAGGGGATACACCATACCAGCAGGCTGGCCAATCATGGTGTGTCTCCCAGCTGTACACTTGAACCCAACAAAATATCAGGATCCTCTTTCCTTCAACCCTTGGAGATGGGAGGGAGAGCCACTGAATAGTGCCAGCAAACATTTCGTGGCTTTCGGTGGAGGCATGAGATTTTGTGTTGGGGCAGACTTCGCTAAGGTTCAGATGGCTGTTTTTATTCATAACTTGGTAACCAAGTACAGGTGGCGATATATCAAAGGAGGGAATATTGTTCGAAGGCCTGGTTTACAATTTCCAGATGGCTTTCACGTCCAGATCATAGACAAAGATCAAAGGAAGACATAA 1434 0.4198 MLLIKVMESGYPKETPMGKVWFSDFYGTISYSLRTKEQEKYVCFSASCITHWIYRWRNANCNGKLPPGSLGLPLLGETLQFFSPHTSSDIHPFIKQRITRYGPIFKTSLVGRPIVVSTDPDFNSFIFKQEGQMFQSWYPDSITKIFGGQSIGFLHGFLFKYLKNMVLNVFGVESLKMMLSEVELTACTTLQQWSRQETVELNEATKKMIFALTTKKLLGCDSTTSSENLMDNFNAFIQGLFSFPLDIPGTTHHKCMQKNLAKKEPILTESIALDLMFLLLFVSFETTSLTLTYAIKLLSDHPLVLKQLQEEHEAILKQREDPNSGITWQEYKSMTFTFQFINETLRLANIAPGIFRKALRDINFRGYTIPAGWPIMVCLPAVHLNPTKYQDPLSFNPWRWEGEPLNSASKHFVAFGGGMRFCVGADFAKVQMAVFIHNLVTKYRWRYIKGGNIVRRPGLQFPDGFHVQIIDKDQRKT 477
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo4g03124 477 Pfam Cytochrome P450 66 242 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo4g03124 477 Pfam Cytochrome P450 262 455 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo4g03124 477 PANTHER CYTOCHROME P450 26 64 446 - -
Pumo4g03124 477 SUPERFAMILY Cytochrome P450 63 467 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo4g03124 477 PRINTS P450 superfamily signature 282 299 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo4g03124 477 PRINTS P450 superfamily signature 339 350 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo4g03124 477 PRINTS P450 superfamily signature 422 433 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo4g03124 477 PRINTS P450 superfamily signature 413 422 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo4g03124 477 CDD CYP90-like 97 469 - -
Pumo4g03124 477 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 415 424 IPR017972 GO:0005506|GO:0016705
Pumo4g03124 477 Gene3D Cytochrome P450 57 470 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo4g03124 477 PRINTS E-class P450 group I signature 98 117 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo4g03124 477 PRINTS E-class P450 group I signature 378 402 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo4g03124 477 PRINTS E-class P450 group I signature 422 445 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo4g03124 477 PRINTS E-class P450 group I signature 412 422 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo4g03124 477 PRINTS E-class P450 group I signature 338 356 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo4g03124 Pumo-Chr4 64196605 64204163 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo4g03124 41 472 Cytochrome P450 AT1G12740 61.277 0.0 600
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo4g03124 - - gmx:100794607 671.389