Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo4g03120 ATGGTTCAGCTTAACCAGCTATTGCTCTTTCTGCTTCTCTTTCTCTTTCTCTCTCTAACCCCCACTCCCACTCTCTCTCTAAACCAAGATGGTCTCTTCCTCCTTGAGGCAAAGCTCCAACTCTCTGACCCCACAAACGCGCTTTCTGATTGGAACCACCGCGACGCCACCCCATGCAAATGGACCGCCGTCACCTGCGACGCCGCCACCGGCGGCGTCGTCGCCCTCGACCTCTCCAACATGCAGCTCTCCGGCCACGTCCCCGCAGCCGCCCTCTGCCGCCTCCCCTCCCTCTCCATTCTCTATCTCGGCAACAACAACCTCAACGCCACCCTCCCCGCCGCCGCCTTCGCCGCCTGCGCCGCCCTCCGCCACCTCAACCTCTCCCAGAACCTCCTCTCCGGCGCCCTCCCCGCCGCCCTCCCCGACCACCTCCCCAACCTCACCACCCTCGACCTCTCCTCCAACAACTTCTCCGGCGAGATTCCGGCAACCTTCGCCCGCTTCCGGCGACTCCAAAACCTCTCCCTCGTCAGCAACCTCCTCGCCGGAACCATCCCCTCTTCCCTCGGCAACGTTTCATCCCTCAAAACGCTTCACCTCGCTTACAACCCCTTCCACGCCGGTCCCATTCCGAACGAGTTCGGTAACCTCACGAATCTCGAGGAGCTCTGGCTCGCAGGGTGCAGCCTTGTGGGCCCCATTCCAAGTTCTCTGGGCAAGCTAACTAAGCTTTGGAACCTCGACCTGTCGCAGAACAAACTCGTCGGAAACATACCCGAACAACTCGTGTCGGGTTTGCACAGCATTGTACAAATCGAACTCTACGAGAACTCTCTCTCCGGCGCGTTGCCACGCGCCGCGTTTGCCAACCTCACCAACTTGGAACGATTCGATGCCTCGTGGAACGAGTTGACTGGGACGATTCCGGACGAGTTGTGCGGGTTGAGGAAACTCGGGTCGCTGAACCTGTTCGCTAATAAACTCGAGGGTTCTCTGCCGGAGAGTATATTGAACTCGGAGAACTTGTACGAGTTGAAGTTGTTCAACAACTCGCTCAATGGGTCGTTGCCGAGTGGGTTGGGTAATAACTCGAAGTTGCAGAGCTTCGACGTTTCGTATAACAGGTTCTCCGGCGAGGTTCCGGCGAGGCTGTGCGGCGGGGGAACGTTGGAGGAGCTGATTCTGATTTACAATTCGTTTTCCGGGAGCATCCCCGAGAGTCTCGGGGAATGCAAGAGTTTGAGGAGGGTTCGGCTTAGGAATAATAACCTTGCTGGTGTTGTGCCTGAGGGGTTATGGGGTTTGCCCCATTTGTATTTTTTGGAGCTTGTTGAGAATTCTCTTTCTGGGTCGATTTCTAATTCGATTTCCGGGGCTTGGAACTTGTCAATGTTGTTAATTTCGGGGAATAACTTTTCTGGGTCGATTCCTGAGGGGGTTGGGGAATTGGGTAATCTTGAAGAGTTTGTTGCTGATCATAATAGTCTTACTGGTCTGATTCCAAAAAGTGTGGTTAGGTTGAGTCAGTTGGATAGGCTTGTTCTCAGAGACAATCAGCTTTTAGGAGAAATTCCTGTTGGAGTTGGTGGTTGGAAGAAGCTCAATGAGCTTGATTTGGCGAATAATAGGTTAGATGGGAGTATTCCTAAGGAGTTGGGAAAATTGCCGGTGCTTAATTATCTTGATCTTTCTGGGAATCGGTTCTCTGGTGAGATTCCAATTGAGCTGCAGAATTTGAAGCTTAATTTGTTGAATTTGTCCAACAATCAGCTTTCTGGGGCGATTCCTCCTCTTTATGCTAATGAGAATTATGGAAAGAGTTTTATTGGGAATCCGGGTTTGTGTAGGGCTCTCTCTGGACTGTGTCCAAGCTTGGGTGGTGAGAGTGAGGGTAAGAGCAGGAAGTATGTGTGGATTTTCCGGTTCATATTTGTGCTTGCTGGGATTGTGTTAATTGTTGGGGTGGCTTGGTTTTACTTCAAATTCCGGGACTTCAAGAAGATCAAAAAGGGGTTTCACTTTTCAAAGTGGAGGTCGTTTCATAAACTGGGGTTTAGTGAGTTTGAGATTGTTAAATTGCTGAATGAGGATAATGTAATAGGGAGTGGGGCATCTGGGAAGGTTTACAAAGTTGCTCTGAGTAATGGAGAGGTGGTGGCAGTGAAGAAATTGTGGGGAGCAACTAAGATGGGAGATGGATCTGCTGATTCTGAGAAGGATGGGTTTGAAGTTGAGGTTGAAACATTGGGAAAGATTCGGCACAAGAATATTGTGAGATTATGGTGTTGCTGCAACAGTAGGGATAGCAAACTCTTGGTTTATGAGTACATGCCAAATGGGAGTCTTGCTGATTTGTTGCACAGTAGCAAGAAAAGCTTGTTAGATTGGCCCACTAGATATAAAATTGCTATTGATGCTGCTGAGGGGCTCTCATATTTGCATCATGATTGTGTCCCCCCTATTGTTCATAGGGATGTCAAATCTAGCAATATTTTGCTAGATGATGAGTTTGGAGCAAAAGTTGCCGATTTTGGAGTTGCCAAAATTGTCAATGGAGCCAACCAAGGGGCAGAATCCATGTCTGTGATTGCCGGATCTTATGGTTACATTGCACCAGAATACGGTTATACTCTTCGGGTGAATGAAAAGAGTGACATTTATAGCTTTGGAGTGGTGATTTTGGAGTTGGTAACTGGGAAGCCCCCTCTTGACCCAGAGTATGGGGAAAAGGATCTTGTAAAATGGGTTTACTCCACATTGGATCAGAAAGGAGAGGATGAGGTGATTGATCCCACTTTGGATTTTCAATATAGGGAAGAAATCAGCAAGGTACTCAGCGTTGGGCTTCATTGCACTAGCTCTCTTCCTATTACACGCCCTTCAATGCGTACAGTGGTGAAAATGCTGAAGGAAGTAACTGAACTTCCCAAATCCTTAAGTGGAAAACTCTCTCCTTATTTTCAGGAAGAGGCCTCGGATATTGATCATCAGGGAAGCTTAGTTTGA 3009 0.4925 MVQLNQLLLFLLLFLFLSLTPTPTLSLNQDGLFLLEAKLQLSDPTNALSDWNHRDATPCKWTAVTCDAATGGVVALDLSNMQLSGHVPAAALCRLPSLSILYLGNNNLNATLPAAAFAACAALRHLNLSQNLLSGALPAALPDHLPNLTTLDLSSNNFSGEIPATFARFRRLQNLSLVSNLLAGTIPSSLGNVSSLKTLHLAYNPFHAGPIPNEFGNLTNLEELWLAGCSLVGPIPSSLGKLTKLWNLDLSQNKLVGNIPEQLVSGLHSIVQIELYENSLSGALPRAAFANLTNLERFDASWNELTGTIPDELCGLRKLGSLNLFANKLEGSLPESILNSENLYELKLFNNSLNGSLPSGLGNNSKLQSFDVSYNRFSGEVPARLCGGGTLEELILIYNSFSGSIPESLGECKSLRRVRLRNNNLAGVVPEGLWGLPHLYFLELVENSLSGSISNSISGAWNLSMLLISGNNFSGSIPEGVGELGNLEEFVADHNSLTGLIPKSVVRLSQLDRLVLRDNQLLGEIPVGVGGWKKLNELDLANNRLDGSIPKELGKLPVLNYLDLSGNRFSGEIPIELQNLKLNLLNLSNNQLSGAIPPLYANENYGKSFIGNPGLCRALSGLCPSLGGESEGKSRKYVWIFRFIFVLAGIVLIVGVAWFYFKFRDFKKIKKGFHFSKWRSFHKLGFSEFEIVKLLNEDNVIGSGASGKVYKVALSNGEVVAVKKLWGATKMGDGSADSEKDGFEVEVETLGKIRHKNIVRLWCCCNSRDSKLLVYEYMPNGSLADLLHSSKKSLLDWPTRYKIAIDAAEGLSYLHHDCVPPIVHRDVKSSNILLDDEFGAKVADFGVAKIVNGANQGAESMSVIAGSYGYIAPEYGYTLRVNEKSDIYSFGVVILELVTGKPPLDPEYGEKDLVKWVYSTLDQKGEDEVIDPTLDFQYREEISKVLSVGLHCTSSLPITRPSMRTVVKMLKEVTELPKSLSGKLSPYFQEEASDIDHQGSLV 1002
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo4g03120 1002 SMART LRR_typ_2 145 168 IPR003591 -
Pumo4g03120 1002 SMART LRR_typ_2 120 144 IPR003591 -
Pumo4g03120 1002 SMART LRR_typ_2 412 435 IPR003591 -
Pumo4g03120 1002 SMART LRR_typ_2 292 316 IPR003591 -
Pumo4g03120 1002 SMART LRR_typ_2 193 217 IPR003591 -
Pumo4g03120 1002 SMART LRR_typ_2 508 532 IPR003591 -
Pumo4g03120 1002 SMART LRR_typ_2 267 291 IPR003591 -
Pumo4g03120 1002 SMART LRR_typ_2 556 579 IPR003591 -
Pumo4g03120 1002 SMART LRR_typ_2 95 119 IPR003591 -
Pumo4g03120 1002 SMART LRR_typ_2 242 266 IPR003591 -
Pumo4g03120 1002 ProSitePatterns Serine/Threonine protein kinases active-site signature. 822 834 IPR008271 GO:0004672|GO:0006468
Pumo4g03120 1002 FunFam MDIS1-interacting receptor like kinase 1 782 986 - -
Pumo4g03120 1002 FunFam Receptor-like protein kinase HSL1 679 777 - -
Pumo4g03120 1002 Pfam Leucine rich repeat N-terminal domain 28 67 IPR013210 -
Pumo4g03120 1002 SUPERFAMILY RNI-like 76 425 - -
Pumo4g03120 1002 FunFam Receptor-like protein kinase HSL1 318 625 - -
Pumo4g03120 1002 Pfam Leucine rich repeat 96 158 IPR001611 GO:0005515
Pumo4g03120 1002 Gene3D Ribonuclease Inhibitor 189 266 IPR032675 -
Pumo4g03120 1002 Gene3D Ribonuclease Inhibitor 27 188 IPR032675 -
Pumo4g03120 1002 SMART serkin_6 695 988 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo4g03120 1002 ProSitePatterns Protein kinases ATP-binding region signature. 701 724 IPR017441 GO:0005524
Pumo4g03120 1002 Gene3D Transferase(Phosphotransferase) domain 1 778 983 - -
Pumo4g03120 1002 ProSiteProfiles Protein kinase domain profile. 695 988 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo4g03120 1002 FunFam LRR receptor-like serine/threonine-protein kinase ERL1 27 193 - -
Pumo4g03120 1002 Gene3D Ribonuclease Inhibitor 267 625 IPR032675 -
Pumo4g03120 1002 SUPERFAMILY Protein kinase-like (PK-like) 695 970 IPR011009 -
Pumo4g03120 1002 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 196 972 - -
Pumo4g03120 1002 SUPERFAMILY RNI-like 321 626 - -
Pumo4g03120 1002 FunFam Leucine-rich receptor-like protein kinase family protein 211 311 - -
Pumo4g03120 1002 Gene3D Phosphorylase Kinase; domain 1 677 777 - -
Pumo4g03120 1002 Pfam Protein kinase domain 697 915 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo4g03120 Pumo-Chr4 64152367 64155921 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo4g03120 23 1002 Receptor kinase-like Gene Family AT1G28440 59.860 0.0 1137
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Pumo4g03120 Pkinase 1.3e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo4g03120 - - gmx:100778128 1643.63