Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo4g03116 ATGGCGCAATTACCTCCGAAGATCCCAAACATGTCACCAAGTTGGCCAGACTTATCTTCTCATAATCAGAAGATGCCATTGCCACCTATCAGCAACGGCACCAACAACAACACAGGCCATCATTATCAGCACAATCAAAACCCTTCTTGGGTGGACGAGTTTCTTGACTTCTCCTCGGCGCGGCGCGGCGCTCACCGGCGGTCGGTGAGCGATTCCATCGCCTTCTTGGAGGCGCCAATGAGGTGTGGTGAGAATCATAATAATAATAATAATAATAATGATGACAATGAGAATAATGAGTTTGACAAGTTTGATGATGAACAATTCATGTCCATGTTCACGGATGAAGTAGTGCTCTCTGGGGTCCCCATGCCACCACCAACCTTGTCCTCCTCTAACCCTTCAAGCCCTTCTGATCAGAACTTCATCAATGATGAGAGAGAGACCAGCCAGAAGGAGAAGAAGCTGCAAGAGGAGCACCACCACCACCAATTGAAAAATGAAGCAGATGAGGTTGAAAGCCAATGCAAACAGGAAATTATACAGCCTCCTAATGATAACAATACTTCTTCTTCCAATGAGAGAATTACTGACCCCAAGAGAGTCAAAAGAATCTTGGCTAACAGACAATCTGCACAAAGATCGCGAGTGAGGAAGCTGCAATACATATCAGAGCTTGAGCGAAGTGTAACTTCATTACAGGCCGAAGTTTCAGTGCTGTCTCCAAGGGTTGCATTTTTAGATCATCAACGCTTGCTTCTAAATGTCGACAACAGTGCTCTCAAGCAAAGAATCGCTGCCCTTGCTCAAGACAAGATCTTTAAAGATGCTCATCAAGAGGCACTGAAGAGGGAGATAGAGAGACTAAGGCAAGTTTATCACCAACAAAGCCTCAAGAAGATGGAAAATGCTGCAGGGTCACCATTACCATCACCAAAGCCTATATGTGAGGCTCAAACAGAAAAGGAAGCACAACTTCTCAACGCTTGA 990 0.4525 MAQLPPKIPNMSPSWPDLSSHNQKMPLPPISNGTNNNTGHHYQHNQNPSWVDEFLDFSSARRGAHRRSVSDSIAFLEAPMRCGENHNNNNNNNDDNENNEFDKFDDEQFMSMFTDEVVLSGVPMPPPTLSSSNPSSPSDQNFINDERETSQKEKKLQEEHHHHQLKNEADEVESQCKQEIIQPPNDNNTSSSNERITDPKRVKRILANRQSAQRSRVRKLQYISELERSVTSLQAEVSVLSPRVAFLDHQRLLLNVDNSALKQRIAALAQDKIFKDAHQEALKREIERLRQVYHQQSLKKMENAAGSPLPSPKPICEAQTEKEAQLLNA 329
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo4g03116 329 Gene3D - 199 271 - -
Pumo4g03116 329 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 198 250 IPR004827 GO:0003700|GO:0006355
Pumo4g03116 329 Coils Coil 279 299 - -
Pumo4g03116 329 MobiDBLite consensus disorder prediction 13 46 - -
Pumo4g03116 329 MobiDBLite consensus disorder prediction 119 176 - -
Pumo4g03116 329 SUPERFAMILY Leucine zipper domain 200 254 IPR046347 GO:0003700|GO:0006355
Pumo4g03116 329 MobiDBLite consensus disorder prediction 1 46 - -
Pumo4g03116 329 Coils Coil 155 182 - -
Pumo4g03116 329 FunFam Basic leucine zipper 61 199 272 - -
Pumo4g03116 329 SMART brlzneu 196 260 IPR004827 GO:0003700|GO:0006355
Pumo4g03116 329 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 203 218 IPR004827 GO:0003700|GO:0006355
Pumo4g03116 329 MobiDBLite consensus disorder prediction 299 329 - -
Pumo4g03116 329 MobiDBLite consensus disorder prediction 81 101 - -
Pumo4g03116 329 CDD bZIP_plant_RF2 201 251 IPR044759 GO:0003700|GO:0006355
Pumo4g03116 329 PANTHER BASIC LEUCINE ZIPPER 34 1 308 - -
Pumo4g03116 329 MobiDBLite consensus disorder prediction 145 175 - -
Pumo4g03116 329 Pfam bZIP transcription factor 200 244 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo4g03116 Pumo-Chr4 63912829 63917188 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo4g03116 1 277 bZIP Transcription Factor Family AT3G58120 57.807 2.25e-97 288
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Pumo4g03116 bZIP_2 4.1e-09 CL0018