Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo4g03092 ATGATGGAATCCTCTACAGTTCGGTATCGGCCAAATACTCCTCTGGTTCTCAAGGGAATCTCTCTCACCATTGAAGGAGGAGAAAAGATTGGTGTTGTTGGTCGTACAGGGAGTGGACAATCAACCCTCATACAGGTGTTATTTAGGTTGATTGAGCCTTCAGCTGGGACAATAACTGTTGATGGAATCAACATTTGCACTGTGGGCCTTCATGATCTGAGGTCTAGATTTGGAATTATTCCTCAAGAGCCTGTCCTCTTTCAAGGAACAGTACGAAGCAACGTTGACCCCCTTGGACTGTATTCAGAAGAAGAAATTTGGAAGAGCCTTGAGCGCTGCCAACTGAAAGATGTGGTGGCTGCAAAGCCAGAGAAACTTGAGGCTTCAGTGGTTGATGGTGGAGGCAATTGGAGTGTGGGGCAAAGACAGCTTCTTTGCTTGGGAAGGATGATGCTAAAACGCAGCAAAATACTTTTCATGGATGAGGCAACAGCATCCGTTGATTCACAAACTGATGCTGTGATACAAAAGATCATCCGTGAGGACTTTGCAGGTCATACAATTATCAGCATTGCTCATAGAATACCAACAGTCATGGATTGTGACAGGGTTTTAGTCATTGATGCAGATGGAGATGCCTTCCAAATCCAACTCCAAGAAACTATACTTGTGGAGACTTACTACCCCAGTAGCTATTTATAA 702 0.443 MMESSTVRYRPNTPLVLKGISLTIEGGEKIGVVGRTGSGQSTLIQVLFRLIEPSAGTITVDGINICTVGLHDLRSRFGIIPQEPVLFQGTVRSNVDPLGLYSEEEIWKSLERCQLKDVVAAKPEKLEASVVDGGGNWSVGQRQLLCLGRMMLKRSKILFMDEATASVDSQTDAVIQKIIREDFAGHTIISIAHRIPTVMDCDRVLVIDADGDAFQIQLQETILVETYYPSSYL 233
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo4g03092 233 CDD ABCC_MRP_domain2 6 209 - -
Pumo4g03092 233 Pfam ABC transporter 17 165 IPR003439 GO:0005524
Pumo4g03092 233 Gene3D - 1 224 IPR027417 -
Pumo4g03092 233 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 2 233 IPR003439 GO:0005524
Pumo4g03092 233 SMART AAA_5 26 210 IPR003593 GO:0016887
Pumo4g03092 233 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 3 209 IPR027417 -
Pumo4g03092 233 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 3 214 - -
Pumo4g03092 233 FunFam Multidrug resistance-associated protein member 4 1 227 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo4g03092 Pumo-Chr4 61479606 61482675 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo4g03092 10 211 Calmodulin-binding Proteins AT2G36910 30.882 3.47e-30 116
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo4g03092 - K05666 gmx:100780167 385.185