Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo4g03088 ATGGAAGCGGAGGGCACGGAATCGCGAAAGCAAGCGAGGCTCGCCATTATGGAACTCGCCAACATGATAAGCGTTCCCATGGCGCTAAACGCCGTCGTTCGCCTCAACGTCGCCGACGCCCTCTGGCAAGGCGGCGCCAACGCCCCCCTCTCCGCCGCCGAGATCCTCCCCCGCCTCCTCCCCCCCGCCGCCGACGCCGAGAACCTCCAGCGGCTCCTCCGCATGCTCGCCAGCTACGGCGTCTTCCAAGAGCACCTCGCCGCCGGCGAACGGAAGTACTCCCTCACCGACGTCGGCAAAACGCTCGTCACCGATGAACATGGCCTGTCGTACGCTCATTACGTGCTCCAACATCACCAGGATGCGTTGATGCGAGCGTGGCCATTGGTGCACGAGGCAGTAGTGGACCCTACGAAGGAGCCATTCGAGAGGGCCAATGGAGAGCCAGCATATGGGTACTACCTGAAGCAGCCAGAGATGAACGACCTAATGTTGAGGGCCATGTCAGGGGTGTCAGTGCCCTTCATGAGGGCCATGTTGGAGGGCTATGATGGCTTCCAAGGCGTGGAGAAGCTTGTGGACGTGGGTGGTAGTGGTGGTGATTGCCTCCGCATGATCTTGCAAAAACACCCCACCATCAAAGAAGGGATCAACTTTGACCTGCCTGAAGTTGTGGCCAAAGCCCCACAAATCCCATGTGTAACCCATGTGGGTGGTGACATGTTCAAGTCTATTCCCCAAGGAGATGCTATCTTCATGAAGTGGGTGCTAACAACATGGACTGATGAGGAATGCAAGCACATAATGCAGAACTGTCACAAGGCACTCCCTGAGGGAGGAAAACTAATTGCATGTGAGCCAGTGCTGCCAGAGCACTCAGACGAGAGTCACAGAACGAGGGCTTTGCTTGAGGGTGACATCTTTGTGATGACAATCTACAGAGCCAAGGGGAAGCACAGGACTGAAGAACAGTTCAGGCAATTAGCCATTGATGCAGGCTTCCCCCATTTCAGAGCCTTCCATGTTGACCATTTCTACACTGTCCTTGAGTTTCAGAAATGA 1062 0.5603 MEAEGTESRKQARLAIMELANMISVPMALNAVVRLNVADALWQGGANAPLSAAEILPRLLPPAADAENLQRLLRMLASYGVFQEHLAAGERKYSLTDVGKTLVTDEHGLSYAHYVLQHHQDALMRAWPLVHEAVVDPTKEPFERANGEPAYGYYLKQPEMNDLMLRAMSGVSVPFMRAMLEGYDGFQGVEKLVDVGGSGGDCLRMILQKHPTIKEGINFDLPEVVAKAPQIPCVTHVGGDMFKSIPQGDAIFMKWVLTTWTDEECKHIMQNCHKALPEGGKLIACEPVLPEHSDESHRTRALLEGDIFVMTIYRAKGKHRTEEQFRQLAIDAGFPHFRAFHVDHFYTVLEFQK 353
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo4g03088 353 Pfam O-methyltransferase domain 131 334 IPR001077 GO:0008171
Pumo4g03088 353 FunFam Caffeic acid 3-O-methyltransferase 1 107 - -
Pumo4g03088 353 SUPERFAMILY "Winged helix" DNA-binding domain 8 105 IPR036390 -
Pumo4g03088 353 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 108 351 IPR029063 -
Pumo4g03088 353 PANTHER O-METHYLTRANSFERASE 17 340 IPR016461 GO:0008168
Pumo4g03088 353 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 17 353 IPR016461 GO:0008168
Pumo4g03088 353 PIRSF O-mtase 1 353 IPR016461 GO:0008168
Pumo4g03088 353 Gene3D Vaccinia Virus protein VP39 108 353 IPR029063 -
Pumo4g03088 353 FunFam Caffeic acid 3-O-methyltransferase 108 353 - -
Pumo4g03088 353 Gene3D - 2 107 IPR036388 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo4g03088 Pumo-Chr4 61424228 61428402 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo4g03088 1 353 Monolignol Biosynthesis Gene Families AT3G53140 75.209 0.0 569
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo4g03088 - - gmx:102663764 682.945