Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo4g03086 ATGGCCAAAAAAGATCAGGAATTTGCCATAGGAATCGACCTTGGCACAACTTACTCGTGTGTTGCAGTATGGCGGGAGCAGCACTGTCGAGTGGAGATCATCCACAATGACCAAGGCAACAACACTACTCCCTCCTGTGTTGCTTTCAAGGACCATGATAGGTTGATTGGTGATGCTGCTAAAAATCAGGCTGCGATCAATTCAGAGAACACTGTTTTTGATGCTAAGAGGTTAATTGGTCGGAAATACAGTGATCCCATTATTCAAAAAGACAAAATGTCCTGGCCATTCAAGGTAGTTGCTGGTACCAACGACAAACCAATGATAGTTGTCAAGTTCAAGGGTCAAGAGAAACACTTTTGTGCTGAAGAAGTATCATCGATGGTCCTTGTGAAGATGCGGGAGATTGCAGAGGCATACTTGGAAACATCGGTGAAGAATGCAGTGATTACTGTGCCTGCATATTTCAATGATGCTCAAAGAAAAGCCACCATAGATGCTGGTGTCATTGCTGGTGTGAATGTTATGCGAATAATCAATGAGCCCACTGCTGCAGCTATTGCATATGGCTTTGACAGGAGAAATACTTGTATTGGAGAGCGAAACATTTTCATCTTTGATCTTGGTGGTGGTACTTTTGATGTGTCTCTCCTTACAATTAAGAACAAGGTCTTCCAAGTTAAGGCCACAGTGGGGAACACTCACCTTGGAGGAGAGGACATTGATAACAGAATGGTGAACTACTTCGTAGAGGAGATCAAGAGGAAGAACAATGTGGACATTAGTCAGAATCCAAGAGCCCTAAGGAGATTGAGAACTGCATGTGAGAGGGCAAAAAGGACACTTTCTTGTGCTCTTACTATCAACATTGAGGTAGATGCTTTATTTCATGGCATTGACTTCTGTTCTTCAATTACTCGTGCAAAATTTGAGGAAATCAATATGGATCTCTTTGAAGAGTGTATGGAGACAGTAGAGAGGTGTATCACCGATGCTAAGATGGACAAGAGCAGTGTGCACGATGTTGTCCTTGTTGGTGGCTCTTCTAGGATTCCCAAAGTGCAGCAGCTATTGCAGGACTTTTTCCAAGGTAAAAATCTGTGCAAGAGCATCAACCCTGACGAGGCTGTTGCTTATGGTGCAGCTGTGCAGGCTGCATTGTTGAGTGAAGGCATTAAGAATGTTCCAGACTTGGTATTGTTGGATGTTGCGCCACTGTCTCTTGGTGTGGCGATAAAAGGAGATCTTATGAGTGTAGTGATTCCAAGGAATACTACTATTCCCGTAAAGAGAACACAGGAATATTTTACAGTTGAAGATAACCAATCCAGTGTCCTGGTAAGGGTTTATGAGGGTGAGAGAACAAGAGCTAGTGATAACAATTTGCTGGGTCTTTTTAGGCTTTCTGGCCTTCCTCCTGCTCCTCGTGGCCTTCGTTTGTATGAAAGCTTTGCCATAGATGAAAATGGTATACTATCTGTGTCTGCTGAGGAAAGAATCACTGGCAGTAAGAACCAGATTACTATAACCAACGAAAAAGAAAGACTGTCAGCAGTAGAAATTAGAAGAATGATTCAAGAAGCGCATAATTATCAGGTTGAAGATCGCAAGTTCCTTAGGATATCCAGTGCAAAGAATGATTTGGATTATTGTGTTTACAAGATTGGGAAAGCTTTAGAGAGGGAGGATATCAACTCAAAGCTTTGCTTACAAGAAAAGGAGGGCATCAATTCTGCTATTAGTAGGGCCACAGCATTGCTTGATGATGATAATAATAATAATAATAATAATAATAATAATAATAATAATAATAATAATAAGCTGCATGATATAATTGTGTTTGAGGCTTGCCTGAAAGAGCTCACGAGCATCTTTGAACGCGTTAAAGCTATGGGCAATATTGGTTAG 1908 0.414 MAKKDQEFAIGIDLGTTYSCVAVWREQHCRVEIIHNDQGNNTTPSCVAFKDHDRLIGDAAKNQAAINSENTVFDAKRLIGRKYSDPIIQKDKMSWPFKVVAGTNDKPMIVVKFKGQEKHFCAEEVSSMVLVKMREIAEAYLETSVKNAVITVPAYFNDAQRKATIDAGVIAGVNVMRIINEPTAAAIAYGFDRRNTCIGERNIFIFDLGGGTFDVSLLTIKNKVFQVKATVGNTHLGGEDIDNRMVNYFVEEIKRKNNVDISQNPRALRRLRTACERAKRTLSCALTINIEVDALFHGIDFCSSITRAKFEEINMDLFEECMETVERCITDAKMDKSSVHDVVLVGGSSRIPKVQQLLQDFFQGKNLCKSINPDEAVAYGAAVQAALLSEGIKNVPDLVLLDVAPLSLGVAIKGDLMSVVIPRNTTIPVKRTQEYFTVEDNQSSVLVRVYEGERTRASDNNLLGLFRLSGLPPAPRGLRLYESFAIDENGILSVSAEERITGSKNQITITNEKERLSAVEIRRMIQEAHNYQVEDRKFLRISSAKNDLDYCVYKIGKALEREDINSKLCLQEKEGINSAISRATALLDDDNNNNNNNNNNNNNNNNKLHDIIVFEACLKELTSIFERVKAMGNIG 635
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo4g03086 635 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 393 544 IPR029047 -
Pumo4g03086 635 PRINTS 70kDa heat shock protein signature 38 50 - -
Pumo4g03086 635 PRINTS 70kDa heat shock protein signature 211 221 - -
Pumo4g03086 635 PRINTS 70kDa heat shock protein signature 60 68 - -
Pumo4g03086 635 PRINTS 70kDa heat shock protein signature 397 416 - -
Pumo4g03086 635 PRINTS 70kDa heat shock protein signature 371 391 - -
Pumo4g03086 635 PRINTS 70kDa heat shock protein signature 148 168 - -
Pumo4g03086 635 PRINTS 70kDa heat shock protein signature 477 493 - -
Pumo4g03086 635 PRINTS 70kDa heat shock protein signature 8 21 - -
Pumo4g03086 635 PRINTS 70kDa heat shock protein signature 339 355 - -
Pumo4g03086 635 Gene3D - 73 128 - -
Pumo4g03086 635 Pfam Hsp70 protein 9 597 IPR013126 GO:0005524|GO:0140662
Pumo4g03086 635 SUPERFAMILY Actin-like ATPase domain 200 389 IPR043129 -
Pumo4g03086 635 Gene3D - 194 368 - -
Pumo4g03086 635 FunFam Heat shock 70 kDa protein 391 545 - -
Pumo4g03086 635 ProSitePatterns Heat shock hsp70 proteins family signature 3. 342 356 IPR018181 -
Pumo4g03086 635 ProSitePatterns Heat shock hsp70 proteins family signature 1. 12 19 IPR018181 -
Pumo4g03086 635 PANTHER HEAT SHOCK PROTEIN 70KDA 9 578 IPR013126 GO:0005524|GO:0140662
Pumo4g03086 635 Gene3D Actin; Chain A, domain 4 237 320 - -
Pumo4g03086 635 FunFam Heat shock protein 70 10 200 - -
Pumo4g03086 635 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 394 549 IPR029047 -
Pumo4g03086 635 Gene3D - 545 631 IPR029048 -
Pumo4g03086 635 FunFam Heat shock 70 kDa 237 320 - -
Pumo4g03086 635 ProSitePatterns Heat shock hsp70 proteins family signature 2. 205 218 IPR018181 -
Pumo4g03086 635 FunFam Heat shock cognate 70 kDa protein 2 321 368 - -
Pumo4g03086 635 SUPERFAMILY Actin-like ATPase domain 9 193 IPR043129 -
Pumo4g03086 635 Gene3D - 10 386 - -
Pumo4g03086 635 FunFam heat shock 70 kDa protein-like 73 128 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo4g03086 Pumo-Chr4 60499897 60501912 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo4g03086 1 624 Calmodulin-binding Proteins AT3G12580 65.176 0.0 822
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo4g03086 K03283 - gmx:102667578 964.911