Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo4g03060 ATGAGTCACCAACCACTGAACCACCTTCAACTCGTCCTTCTATCCAATCCTCTACCTATCTATATCTACTTTCCCTTTGCACAATATTCTCCAACAAACAGTACTATGGTGATGATAACTCCCACAAATACTGCAACATGCTTTCTCATACTGGTACCTCTGGTTGTGCTATGGTGTTGGAAGCTACTAAACTGGGTGTGGCTGAGGCCAAAGAGATTGGAGAGGGCATTGAGGGCACAGGGCCTTCAGGGGAATCCCTACACCCTTTTGGTTGGGGACACTCGGGAAATGATTAAGGTGCTCATGCAAGCTGCCAAATCTCAACAATCCACAAATTTTCTCTCAGATGGTAATAAGGACGCAGCACCGCATATCACAACCTTTAACCATCATATTGTCAACAAATTCGGCCAGAATTCATTTTTTTGGGAAGGTACCAAACCAAAAGTGATCATCACCGACCCTGAGCAAATCAAAGAAGTCTTCAACAAGATCCAAGACTTTGAGAAACCCAAGTTGAGTCCCATTTTCAAGTTGTTGGGCTCTGGACTTGCAAATTTAGAAGGCGAGAAATGGCGTGTACATCGAAAGATTATCAACCCTGCTTTCCATTTAGAAAAATTGAAGGTTATGTTACCAGTATTTCTTAAATGTTGTGATGATATGGTTTCCAAATGGGAAGAGATGCTATCTTCAAATGACAAATGTGAAATTGATGTGTGGCCTTTCCTTCAAAATTTAACCTGTGATATTATATCTAGAACAGCATTTGGAAGCAGCTATGAAGAAGGAAAAATAATATTTGAACTTTTGAAAGAGCAAGCTGGACTTATTATGAAATCACGGAACGCTTACATTCCAGGATGGTGGTTGCTACCAACAACTACAAATAGAAGGATGAAGAAAATTGATACTGATATACGAGCATCACTTAAAGGTATCATCAACAAACGAGGGAATGCAATGAAGGCTGGTGAAGTCTTGAACAATGACTTGTTGGGCATGCTTTTGGAATCGAATCATATGGAAATACAAGAACATGGAAACAATAAGAGTGCTGTAATGACTAACCAAGAAGTAATTGAGGAATGCAATGCATTCTACATAGCAGGACAAGAAACCACATCGGTTTTACTGGTTTGGACAATGGTATTGTTGAGTATATATCCTAATTGGCAAGCACGTGCTAGGGAGGAAGTGTTGAATGTTTTTGGTAACCAAAAGCCAGACTATAATGGGCTAAGTCACCTTAAAATTGTGACCATGATTTTATACGAGGTTCTCAGGTTATACCCACCTTTAGTTTATTTCGCTCGAGCTACCAAGAATGATGTGAAACTTGGAAACCTTTCCCTACCTGCAGGAGTGCAAGTTTCCTTACCAATATTGTTGATTCACCAAGATCCTGATATTTGGGGTGATGATGCTACAGAGTTCAACCCAGAAAGATTTGCTGAAGGAGTAGCAAAGGCAACAAAAGGCCAAGTCACATTTTTCCCATTTGGATGGGGTCCTAGAGTGTGCATGGGCCAAAATTTTGCTCTATTAGAAGCAAAGATGGTTTTGTCATTACTCTTACAACGCTTCTCATTTGAGCTTTCTCCAGCCTATGCACATGCTCCAGTCACTGTACTCACTCTTAATCCAAAATTTGGGGCTCATATCATCTTACAAAAGTTGTAG 1683 0.4034 MSHQPLNHLQLVLLSNPLPIYIYFPFAQYSPTNSTMVMITPTNTATCFLILVPLVVLWCWKLLNWVWLRPKRLERALRAQGLQGNPYTLLVGDTREMIKVLMQAAKSQQSTNFLSDGNKDAAPHITTFNHHIVNKFGQNSFFWEGTKPKVIITDPEQIKEVFNKIQDFEKPKLSPIFKLLGSGLANLEGEKWRVHRKIINPAFHLEKLKVMLPVFLKCCDDMVSKWEEMLSSNDKCEIDVWPFLQNLTCDIISRTAFGSSYEEGKIIFELLKEQAGLIMKSRNAYIPGWWLLPTTTNRRMKKIDTDIRASLKGIINKRGNAMKAGEVLNNDLLGMLLESNHMEIQEHGNNKSAVMTNQEVIEECNAFYIAGQETTSVLLVWTMVLLSIYPNWQARAREEVLNVFGNQKPDYNGLSHLKIVTMILYEVLRLYPPLVYFARATKNDVKLGNLSLPAGVQVSLPILLIHQDPDIWGDDATEFNPERFAEGVAKATKGQVTFFPFGWGPRVCMGQNFALLEAKMVLSLLLQRFSFELSPAYAHAPVTVLTLNPKFGAHIILQKL 560
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo4g03060 560 PANTHER CYTOCHROME P450 FAMILY MEMBER 57 552 - -
Pumo4g03060 560 CDD CYP72 128 556 - -
Pumo4g03060 560 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 501 510 IPR017972 GO:0005506|GO:0016705
Pumo4g03060 560 FunFam Cytochrome P450 734A1 67 560 - -
Pumo4g03060 560 PRINTS E-class P450 group I signature 498 508 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo4g03060 560 PRINTS E-class P450 group I signature 508 531 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo4g03060 560 PRINTS E-class P450 group I signature 379 405 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo4g03060 560 PRINTS E-class P450 group I signature 133 152 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo4g03060 560 PRINTS E-class P450 group I signature 359 376 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo4g03060 560 PRINTS E-class P450 group I signature 247 265 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo4g03060 560 PRINTS P450 superfamily signature 422 433 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo4g03060 560 PRINTS P450 superfamily signature 370 387 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo4g03060 560 PRINTS P450 superfamily signature 499 508 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo4g03060 560 PRINTS P450 superfamily signature 508 519 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo4g03060 560 Gene3D Cytochrome P450 116 559 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo4g03060 560 Pfam Cytochrome P450 130 536 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo4g03060 560 SUPERFAMILY Cytochrome P450 124 558 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo4g03060 Pumo-Chr4 59777372 59785053 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo4g03060 50 560 Cytochrome P450 AT3G14690 53.411 0.0 582
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo4g03060 - K17873 gmx:100781923 956.436