Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo4g03031 ATGGCTTCTTTCCAAAGCATCAACAACATTGAAACCCAAATTCCACCAGAGCTCCTCATAGCTCAAATCATGCAACTCCATGCAAGCATCTCCAAGCTTGAATCCCTAAGGCCATGCAAGCAAGTCAATAGCCTCTTCACCCACCTAGTGAAGCTTTGCACCCTCCCTTCATCCATTGACATCGAGGCCTTGCCCCAAGAGGTGCAAGAAATGCGTGAGAGCCTCATCACCCTCAGTGGCCACGCTGAGGGGCTATTGGAGCTTGAATTCGCAACCTTCATAAGCCTCACGCCCGAGCCGATGAAGAACGTAACCCTTTTCCCCTACTATGGAAACTATGTGAAACTAGCAAACATGGAGAGCAAAATCCTAAAAGAAAATGGGGTGGTGAGTCCAAAGAAAGTGGCGTTTGTAGGGTCAGGTCCAATGCCACTCACTTCCATTGTAATGGCCACTCACCACATGGAGTCCACACACTTTGACAACTTTGATATCAATGAGAAGGCCAACGAGGTGGCTCGAAAGATTATTTCTTCCGATGTGGCGCTCGAGAAGAGGATGAAGTTTGAGACACAAGATGTCATGGAAGTGAGGGAGAGGTTGGGGCAATATGATTGTATCTTTTTGGCAGCACTTGTGGGGATGAGTAGGGAAGCAAAAGTGAAGATTTTGGGACACATAAGGAAGTACATGAAGGAGGGAGGGACTTTGCTTGTGAGAAGTGCAAAAGGGGCAAGGGCTTTCTTGTACCCTATTGTTGAGGAACGTGACATGGTGAATTTTGAGGTGCTTACCATCTTTCACCCCACTAATGATGTGATCAACTCGGTTGTTCTTCTTCGCAAGCCTAAGGCTTAA 858 0.472 MASFQSINNIETQIPPELLIAQIMQLHASISKLESLRPCKQVNSLFTHLVKLCTLPSSIDIEALPQEVQEMRESLITLSGHAEGLLELEFATFISLTPEPMKNVTLFPYYGNYVKLANMESKILKENGVVSPKKVAFVGSGPMPLTSIVMATHHMESTHFDNFDINEKANEVARKIISSDVALEKRMKFETQDVMEVRERLGQYDCIFLAALVGMSREAKVKILGHIRKYMKEGGTLLVRSAKGARAFLYPIVEERDMVNFEVLTIFHPTNDVINSVVLLRKPKA 285
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo4g03031 285 ProSiteProfiles Nicotianamine synthase (NAS)-like family profile. 11 285 IPR004298 GO:0030410|GO:0030418
Pumo4g03031 285 Pfam Nicotianamine synthase protein 17 284 IPR004298 GO:0030410|GO:0030418
Pumo4g03031 285 Gene3D Vaccinia Virus protein VP39 19 284 IPR029063 -
Pumo4g03031 285 PANTHER NICOTIANAMINE SYNTHASE 3 17 283 IPR004298 GO:0030410|GO:0030418
Pumo4g03031 285 CDD AdoMet_MTases 163 239 - -
Pumo4g03031 285 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 123 241 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo4g03031 Pumo-Chr4 58722830 58723687 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo4g03031 18 282 Nicotianamine Synthase Gene Family AT5G04950 50.000 2.54e-91 272
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo4g03031 K05953 - gmx:100775553 531.561