Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo4g03027 ATGGTGGAAGAAGCCAAGGTGGTTTTGTTGGGCTCAGGGTTCAGTATGTTTGGGATGAGAGCTAAGATAGCTTTGGCAGAGAAAGGAATCAAATATGACTACAAGGAAGAGGATCTCACCAACAAGAGCCCCTTGCTTCAAGAAATGAACCCAATTCACAAGAAGATTCCAGTTCTTATACATCATGGGAGACCAATCTGTGAGTCCCTCATAATTGTTGAGTATATTGATATGGTTTGGCACAACAATTCTCCCTTGCTTCCCTCTGATCCCTATCACAAAGCTCAAGCCAGGTTCTGGGCTGATTTTGTAGATCAGAAGGTGTATCATGCTTCTAAGAGAGTATGGATTTCAAAGGGAGACGAGCAAGAGGAGGCAAAGAAGGACTTCCTAGAGAGCTTAAAGCAATTGGAGGAGTTTCTTGGAGACAAGCCTTATTTTGGGGGTGACACATTTGGGTTTGTTGATGTTGCTCTCATCCCTTTCTATTGCTGGTTTTATACTTATGAGAGCCTTTGGCAACTTCAAAGTGGAGGCAGAGTGTCCAAAACTTATCTCCTGGGCCAAGAGATGCATGAAGAAGGAAAGTGTATCTGA 597 0.4338 MVEEAKVVLLGSGFSMFGMRAKIALAEKGIKYDYKEEDLTNKSPLLQEMNPIHKKIPVLIHHGRPICESLIIVEYIDMVWHNNSPLLPSDPYHKAQARFWADFVDQKVYHASKRVWISKGDEQEEAKKDFLESLKQLEEFLGDKPYFGGDTFGFVDVALIPFYCWFYTYESLWQLQSGGRVSKTYLLGQEMHEEGKCI 198
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo4g03027 198 CDD GST_C_Tau 91 170 IPR045074 GO:0004364|GO:0006749
Pumo4g03027 198 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 11 172 IPR045073 -
Pumo4g03027 198 Pfam Glutathione S-transferase, N-terminal domain 10 77 IPR004045 -
Pumo4g03027 198 Gene3D Glutaredoxin 3 89 - -
Pumo4g03027 198 SUPERFAMILY Thioredoxin-like 6 109 IPR036249 -
Pumo4g03027 198 Gene3D - 90 194 - -
Pumo4g03027 198 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 90 198 IPR010987 -
Pumo4g03027 198 SUPERFAMILY GST C-terminal domain-like 81 173 IPR036282 -
Pumo4g03027 198 Pfam Glutathione S-transferase, C-terminal domain 124 169 - -
Pumo4g03027 198 SFLD Main (cytGST) 3 175 - -
Pumo4g03027 198 SFLD Main.3: Omega- and Tau-like 3 175 IPR045073 -
Pumo4g03027 198 FunFam Tau class glutathione S-transferase 1 89 - -
Pumo4g03027 198 CDD GST_N_Tau 7 80 - -
Pumo4g03027 198 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 5 84 IPR004045 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo4g03027 Pumo-Chr4 58684347 58685694 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo4g03027 6 183 Glutathione S-transferase Gene Family AT1G78380 61.798 2.30e-80 237
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo4g03027 K00799 - gmx:548030 330.487