Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo4g03025 ATGAACAAGAGTCCTTTGCTTCTGCAGATGAACCCAATTCACAAGAAGATTCCGGTTCTGATCCACAATGGCAAACCCATTTGTGAATCTGCAATTATAGTGCAGTACATTGATGAGGTCTGGAATGATGACAAGCCTCAAATCTTGCCCTCTGACCCTTACCAGAGAGCTCAAGCCAGATTCTGGGTAGATTACATTGACAAAAAGGTGTATGATACTTGGAAGAAAATGTGGCTTTCTAAAGGAGAAGAGCATGAAGCAGGGAAGAAGGAGTTGATCTCTATCTTTAAGCAATTAGAAGAGACACTCGGTGACAAACCATTTTACGGGGGTGACACGTTTGGGTTTGTTGATCTTTGTTTGATCACTTTCTATAGTTGGTTTTATACTTATGAGACATATGGCAACTTCAAAATGGAAGAAGAGTGTCCTAAACTCATGGCTTGGGCCAAGAGATGCATGCAGAGAGAGACTGTGTCCAAAACTCTTCCTGATGCGAAGAAGGTGTATGATCTTATTGTGACACTGCAGAAGACACTTGAATCGAAATAG 552 0.4149 MNKSPLLLQMNPIHKKIPVLIHNGKPICESAIIVQYIDEVWNDDKPQILPSDPYQRAQARFWVDYIDKKVYDTWKKMWLSKGEEHEAGKKELISIFKQLEETLGDKPFYGGDTFGFVDLCLITFYSWFYTYETYGNFKMEEECPKLMAWAKRCMQRETVSKTLPDAKKVYDLIVTLQKTLESK 183
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo4g03025 183 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 52 172 IPR010987 -
Pumo4g03025 183 Gene3D Glutaredoxin 1 51 - -
Pumo4g03025 183 SUPERFAMILY Thioredoxin-like 2 44 IPR036249 -
Pumo4g03025 183 Pfam Glutathione S-transferase, N-terminal domain 2 39 IPR004045 -
Pumo4g03025 183 Gene3D - 52 182 - -
Pumo4g03025 183 SFLD Main (cytGST) 2 182 - -
Pumo4g03025 183 SUPERFAMILY GST C-terminal domain-like 39 178 IPR036282 -
Pumo4g03025 183 Pfam Glutathione S-transferase, C-terminal domain 86 152 - -
Pumo4g03025 183 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 2 170 IPR045073 -
Pumo4g03025 183 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 1 45 IPR004045 -
Pumo4g03025 183 FunFam Glutathione S-transferase U20 52 183 - -
Pumo4g03025 183 SFLD Main.3: Omega- and Tau-like 2 182 IPR045073 -
Pumo4g03025 183 CDD GST_C_Tau 53 176 IPR045074 GO:0004364|GO:0006749
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo4g03025 Pumo-Chr4 58668841 58670418 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo4g03025 2 178 Glutathione S-transferase Gene Family AT1G78380 65.537 7.31e-87 253
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo4g03025 K00799 - gmx:547925 350.517