Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo4g03023 ATGGATGAAGTAGTTCTTGTGGGGTTCTGGACCAGCCAATATGTGATGAGAGTGAAGATTGCCTTGTTAGAGAAGGGAGTTCAGTTTGTGTACAAGGAAGAAAAAGATATATTTGAGAATCAAAACAAGAGTGAGTTACTACTGAAGTCAAATCCCATTCACAAGAAGGTTCCAGTTCTCATCCACAATGGTAGACCCATATGTGAGTCCCTCATAATCCTTGAGTACATTGATGAGGTTTGGAAGCAAGAAAAACAACTCTTCTCTGATGATCCTTACTACCGAGCCAAAGCCAGGTTTTGGATTGATTTATTTGACAAGAAGATAACTGACTGTGGAAGGAGGATGTGGGCCAGCAAGGGTGAAGACCAAGAGGGTGCAAAGGAAGAGTTTGTGGAGTGCTTGAAACTCTTGGAAAATGAACTTGGAGACAACCCTTATTTTGCTGGTCATTATTTTGGCCTTTTGGATATAGCCTTGATACCATTCACATGCAGGTTCTATACATACGAGACATTTTGCAAATTTAGTGTGGAGAAAGAATGCCCAAGGTTCATGTCATGGGTCAAAAGGTGCAATCAGAGGGAGAGTGTTTCCAAGACACTTCCTGACCCATATAAAGTCTATGACTTCGTGTTGCATCGGACATGA 651 0.4163 MDEVVLVGFWTSQYVMRVKIALLEKGVQFVYKEEKDIFENQNKSELLLKSNPIHKKVPVLIHNGRPICESLIILEYIDEVWKQEKQLFSDDPYYRAKARFWIDLFDKKITDCGRRMWASKGEDQEGAKEEFVECLKLLENELGDNPYFAGHYFGLLDIALIPFTCRFYTYETFCKFSVEKECPRFMSWVKRCNQRESVSKTLPDPYKVYDFVLHRT 216
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo4g03023 216 SFLD Main (cytGST) 1 213 - -
Pumo4g03023 216 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 2 85 IPR004045 -
Pumo4g03023 216 FunFam Glutathione S-transferase U20 91 216 - -
Pumo4g03023 216 SFLD Main.3: Omega- and Tau-like 1 213 IPR045073 -
Pumo4g03023 216 CDD GST_N_Tau 4 81 - -
Pumo4g03023 216 Gene3D Glutaredoxin 1 89 - -
Pumo4g03023 216 SUPERFAMILY GST C-terminal domain-like 79 214 IPR036282 -
Pumo4g03023 216 CDD GST_C_Tau 92 215 IPR045074 GO:0004364|GO:0006749
Pumo4g03023 216 SUPERFAMILY Thioredoxin-like 4 109 IPR036249 -
Pumo4g03023 216 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 91 211 IPR010987 -
Pumo4g03023 216 Gene3D - 91 216 - -
Pumo4g03023 216 Pfam Glutathione S-transferase, C-terminal domain 125 191 - -
Pumo4g03023 216 Pfam Glutathione S-transferase, N-terminal domain 5 79 IPR004045 -
Pumo4g03023 216 FunFam Tau class glutathione S-transferase 1 89 - -
Pumo4g03023 216 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 7 210 IPR045073 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo4g03023 Pumo-Chr4 58645884 58647544 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo4g03023 2 212 Glutathione S-transferase Gene Family AT1G78380 56.872 3.88e-88 257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo4g03023 K00799 - mnt:21390803 336.65