Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo4g03019 ATGGAGGATAGTAATCAATGGTGTCTCTATGACCATGACCCACTTCTTCTCACAGACGTTTCTTTGCAACAAGAATCCTCTTCTTATACTCACTGCTCCAATTCTCTTACACAAACGTCACTGAGCTCTCGGAGTTTGGCTATGGCGGACGAGCCCGTGTCTCGTGGTGACAGCCCCAGCATCGGGTTTTCTCAGGAAAATGGAAGTTTTGAAAGGAACAACGTGAAATTCGATGACCCAATTGTGAAAAATGTGTTTGATGGAAGATCCATTTTGGGGTATTCTCTTACATCCCCAGATTTGGTCATTTGTGCTGGCTCACCAGATATTGTTGGAATCACCTATGGTGATTCCCCTGAGTTGTTGAAGAACAAACATTGCAAGAATGTGGAGTCATCTATGGAGCTTTCTCTAGAGTATGGAATCGAGGGGTCTCAAGTTGAAGTTGACAATGGCCATAAGATCCCAACTGTTAAATTCTCAAACTTCTGTCAAACTTTTGAGCAAGAGGAAGAGCTACTGTCCCCTGAAGCCTCCTTTGAGCTTCTTCCACCCCTTGTAACCAAGAATGAGTCACCCCAAGATCTCTCTCCTAGAGATACCGAGATGCTAGAAGATATTGGTGTGTCTCAGGAGGCAGAAATGGAGTCCTCAGAAGATGCTGATGATATTGGGGTGGAAGAGAAATTTAAGAGGCTGAAAAGAGACTTTGAGTGTCAGAGAAAGGAGCTGGCAGAAACAAGGAGGGAGTTGGGAGAGATCAAGAGGGAGAATCAACAGAAGAGTAGAGAATGCCAAGAAGCTTGGAACTCCTTGAAAGAGCTTCAAAATGAGCTAATGCGCAAGTCCATGCACGTAGGATCTTTGGCATTTGCCATTGAGGGGCAAGTGAAGGAGAAAAGTAGGTGGTTTTCATCACTGAGAGACTTGACGAGGAAATTGAAGATTATGAAAATGGAGCACATCAAGCTAATAGAGGAAGCAGAGGCTAGCAAAAAATATCAAGCAGATATGAGAGAAATGGGGCTTATTATCAAGTCCAAAATAAATGAACAGCTGGAGTCACATGAAGATCTCAAGTCCAAATATATTGAAGGGGCTAAGGAACGGAAAGATCTTTACAATAAGGTTTTGGAGTTGAGAGGAAACATAAGAGTCTCTTGCCGTTGTAGGCCTCTCAATACCGAAGAGATATCTGCCGGAGCAACAATGGCCTTAGATTTCGAATCTGCGAAAGATGGTGAGCTAACTATAATGTCAAATGGAGCTCCTAAAAAGACTTTCAAGTTCGATGCTGTCTTTGGTCCCCAAGCTGAGCAAGCTGATATTTTTGAAGACACAGCACCATTTGCAACCTCAGTTCTAGATGGGTACAATGTATGCATTTTTGCATATGGACAGACTGGGACAGGAAAAACTTTCACAATGGAGGGCACAGAACAGGCTCGAGGTGTTAATTTCAGGACTCTTGAGAAAATGTTTGACATAATCAAGGAGAGACAGAAGCTCTATTGTTATGATATCTCTGTAAGTGTCCTAGAAGTGTACAATGAGCAAATAAGAGATTTGCTGGTTGGAGGAAATCATTCAGGAACAGCTGCGAAAAGACTTGAAATAAGACAAGCTGGTGAAGGAATGCATCACATTCCAGGGTTGGTTGAGGCACATGTGAACAATATGACTGAAGTTTGGGAAGTCCTACAAACCGGTAGCAATGCAAGGGCAGTAAGCTCAACCAATTCCAATGAGCATAGCAGCCGATCACACTGCATTCACTGTGTTATGGTTAAGGGGGAGAATTTGTTGAATGGGGAATGCATGAGAAGCAAGTTATGGCTGGTGGACCTAGCAGGCAGCGAGCGAGTGGCAAAGACAGAAGTGCATGGTGATAGACTGAAGGAGACACAAAATATTAATAGGTCTCTCTCTGCACTTGGTGATGTCATATCAGCTCTTGCAACAAAAAGTTCACACATTCCTTTCAGGAACTCCAAGCTTACACACTTGCTGCAAGACTCATTAGGGGGAGATTCAAAGGCACTCATGTTTGTACAGATCAGTCCTAATGAAAACGATTTGAGTGAGACAATTTGCTCTCTGAACTTTGCTAGTAGAGTAAGAGGAATAGAATTGGGACCTGCAAGAAAGCAGTTGGACACTGTTGAACTTTTGAGACATAAACAAATGGCTGAGAAAGTCAAACAAGAGGTAAGGCTGAAGGATTTGCAAATCAAGAAGATGGAGGAAACAATCCATGGATTAGAGACCAAGATGAAGGAAAGAGATAGTAAGAACAAAAATCTGCAAGAGAAGGTCAAGGAACTGGAATCGCAACTTCTGGTTGAGAGAAAGCTGGCGCGTCAACATGTAGACTCAAAGATTGCTGAGCAGCACCAAATGAAACATCAAGAAGAGCAAAATAATACACTTATGAGACCAGCACTTGCAAATAGACCACTAGTAAGTCTCAAGAATTTTAATGATCCAGTGAGTGGTGGATGGTGCAAAGACCAACAAATAAATTCAGCAAAACCACTCACTGAGAACAACATCTTCAAACCTTGTATACCCTTTTCTACAATGGAGAACTCCATCAAGTGCATTGACCGTGCTGAGAAAGAAAACAATCCTGACATGGCTGACAAAGCCCTACTGCCAAAAAGGCCTGGAAGAGCTTCTATCTGCATGATGACACCGCGTGTTCCTTCAGCCATTGCTTCAAGGAGAAACTCTCTGATTCCACTCCCAAGTATACCTAGCTTAACACAGTTCCAATCACCATTATTACCAAAGTTAACAAACCAAGCTGATCAGAAGGATGTCAATGGGGAATCAGAAACCAACTATGTGCCTGCACAGACTCATTGTGAGAGTCCCAAAGAAGTTAGAAGTGGTGCTAAGAGGATTGGTAGCATACTAAGAAGAAGCCTTCATAAGAAAATACAGCTGAAGTCTCCACTTCAGCAGCACATGAGGAAGGTTGGTGTAAATGTAGGGATGGAGAAGGTTAGAGTTTCCATTGGAAGTAGGGGGAGATTGGCACCAAGGGGGCAAGTTGGAAGTGGTAGAAGAGGAGGTGCTAAAGATATTCAGCAAAAGAATAGTCAAAAGGAAAAGGAAAGGGGATGGATCTGA 3135 0.4293 MEDSNQWCLYDHDPLLLTDVSLQQESSSYTHCSNSLTQTSLSSRSLAMADEPVSRGDSPSIGFSQENGSFERNNVKFDDPIVKNVFDGRSILGYSLTSPDLVICAGSPDIVGITYGDSPELLKNKHCKNVESSMELSLEYGIEGSQVEVDNGHKIPTVKFSNFCQTFEQEEELLSPEASFELLPPLVTKNESPQDLSPRDTEMLEDIGVSQEAEMESSEDADDIGVEEKFKRLKRDFECQRKELAETRRELGEIKRENQQKSRECQEAWNSLKELQNELMRKSMHVGSLAFAIEGQVKEKSRWFSSLRDLTRKLKIMKMEHIKLIEEAEASKKYQADMREMGLIIKSKINEQLESHEDLKSKYIEGAKERKDLYNKVLELRGNIRVSCRCRPLNTEEISAGATMALDFESAKDGELTIMSNGAPKKTFKFDAVFGPQAEQADIFEDTAPFATSVLDGYNVCIFAYGQTGTGKTFTMEGTEQARGVNFRTLEKMFDIIKERQKLYCYDISVSVLEVYNEQIRDLLVGGNHSGTAAKRLEIRQAGEGMHHIPGLVEAHVNNMTEVWEVLQTGSNARAVSSTNSNEHSSRSHCIHCVMVKGENLLNGECMRSKLWLVDLAGSERVAKTEVHGDRLKETQNINRSLSALGDVISALATKSSHIPFRNSKLTHLLQDSLGGDSKALMFVQISPNENDLSETICSLNFASRVRGIELGPARKQLDTVELLRHKQMAEKVKQEVRLKDLQIKKMEETIHGLETKMKERDSKNKNLQEKVKELESQLLVERKLARQHVDSKIAEQHQMKHQEEQNNTLMRPALANRPLVSLKNFNDPVSGGWCKDQQINSAKPLTENNIFKPCIPFSTMENSIKCIDRAEKENNPDMADKALLPKRPGRASICMMTPRVPSAIASRRNSLIPLPSIPSLTQFQSPLLPKLTNQADQKDVNGESETNYVPAQTHCESPKEVRSGAKRIGSILRRSLHKKIQLKSPLQQHMRKVGVNVGMEKVRVSIGSRGRLAPRGQVGSGRRGGAKDIQQKNSQKEKERGWI 1044
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo4g03019 1044 PANTHER KINESIN-LIKE PROTEIN KLP-3 179 919 IPR027640 GO:0003777|GO:0007018
Pumo4g03019 1044 CDD KISc_C_terminal 381 711 - -
Pumo4g03019 1044 ProSiteProfiles Kinesin motor domain profile. 383 709 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Pumo4g03019 1044 FunFam kinesin-like protein KIN-14R 328 711 - -
Pumo4g03019 1044 Coils Coil 730 785 - -
Pumo4g03019 1044 ProSitePatterns Kinesin motor domain signature. 609 620 IPR019821 GO:0003777|GO:0005524|GO:0007018
Pumo4g03019 1044 SMART kinesin_4 381 717 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Pumo4g03019 1044 Pfam Kinesin motor domain 389 709 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Pumo4g03019 1044 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 383 747 IPR027417 -
Pumo4g03019 1044 Gene3D Kinesin motor domain 324 711 IPR036961 -
Pumo4g03019 1044 MobiDBLite consensus disorder prediction 1030 1044 - -
Pumo4g03019 1044 MobiDBLite consensus disorder prediction 1007 1044 - -
Pumo4g03019 1044 Coils Coil 307 327 - -
Pumo4g03019 1044 PRINTS Kinesin heavy chain signature 610 628 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Pumo4g03019 1044 PRINTS Kinesin heavy chain signature 659 680 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Pumo4g03019 1044 PRINTS Kinesin heavy chain signature 579 596 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Pumo4g03019 1044 PRINTS Kinesin heavy chain signature 457 478 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Pumo4g03019 1044 Coils Coil 230 278 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo4g03019 Pumo-Chr4 58576456 58581866 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo4g03019 358 736 Calmodulin-binding Proteins AT5G65930 42.559 8.98e-80 283
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo4g03019 K10406 - gmx:100817247 1925.6