Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo4g03009 ATGGCTTCCGAGAGGGTAAGCCCCGACACGGTGTCGAAAGCCGTCGACGCTCTCCTCAAATGGCGCCACTCCCAATCGGAGACACAGAAACCAAAACTCTTCGACGAAGACGAGGAGTTCGTGTACCTCATCCTCACGCTGAAGAAGGTTCCCGCGAAATCCCGCGTGAACCCTCACAAGATCCCTCTCCCCCACTCCCTCCTCTCCGCCTTCTCCGAACAGTGCCTCATCCTCGACGACCGCCCCAACAAGGCCCGCGTCACCAAGGCCCAGGCCCAATCCAAGATCCAATCCGACTCCATCCCCGTCAACAAAGTCCTCAAGCTCTCCAAGCTCGCCTCCGACTACCGCCCCTTCGAGGCCAAGCGAAAACTCTGCGATTCCTATGATTTGTTTTTTGCAGAGAAGAGCATTGTGCCGCTCCTGCCGCGGCTTCTGGGGAAGAGTTTTTTTAAGAAGAGGAAGATTCCGGTGCCCGTGGATCTGAAGAAGAATAACTGGAAGGAGCAGGTGGAGAGGGCGTGTTCCGCGGCGATGCTGTTTATCAGGACCGGGACCTGTAGTGTGGTTAGGGTTGCCAAGGTGAGAATGGAGAGGGATGAGATTGTGGAGAATGTGGTTGCCGCGATCGAGGGGGCGGTGGAGGTTGTGCCGAAGAAGTGGGGGAATGTGAGGTCCTTGCATTTGAAGCTGCTGGAGAGCGTGGCGCTGCCGGTGTACCAGACGGTGCCGGATGTGAAGTTGAAGATTGAGGGAGTTAGGGTTGAGGATGATGTGGTGGGGAAGAAGAAGAAGAAGAAGAAGGAGAAGGATGGTGAGATTAGCGATTCGGTCGAGGAAGGGAAGAAGAAGAAGAAGAAGAAGGGGAGGATTCATGAGGTTAGGTATATGGATGAGAGTGTTGGCGAGGAGGATGAGATTGAAAATGAATTGGTGAGTGATGGCGATGATAGTGATGATGAGATGGTGAATAAGAAGAGGAAGAAAGGGGTTTCGAGTGACTTGAGTGGTGTTGAGCAATTGAAGAAGTTGGTGTTTAGTGAGTTGAGTGCCAAGGGGAAGAAGAAGAAGAAGGGCTTGTCTGCTGCAAAGGGGGTTAAGGAAGGTTTGATTGGGGGGAGTGGAAGTGAATTGGTTGTGAAGGATGAGGAGTCGGGTGTGAAGAAGAAGAGAGGGAATGTGAAGGTGAAGGCTATGAAAACTGTAAAGGCTACAAAAAGTGCAAAGGCTAAGAAAATTAAGAAAGCTGCGTGA 1254 0.5223 MASERVSPDTVSKAVDALLKWRHSQSETQKPKLFDEDEEFVYLILTLKKVPAKSRVNPHKIPLPHSLLSAFSEQCLILDDRPNKARVTKAQAQSKIQSDSIPVNKVLKLSKLASDYRPFEAKRKLCDSYDLFFAEKSIVPLLPRLLGKSFFKKRKIPVPVDLKKNNWKEQVERACSAAMLFIRTGTCSVVRVAKVRMERDEIVENVVAAIEGAVEVVPKKWGNVRSLHLKLLESVALPVYQTVPDVKLKIEGVRVEDDVVGKKKKKKKEKDGEISDSVEEGKKKKKKKGRIHEVRYMDESVGEEDEIENELVSDGDDSDDEMVNKKRKKGVSSDLSGVEQLKKLVFSELSAKGKKKKKGLSAAKGVKEGLIGGSGSELVVKDEESGVKKKRGNVKVKAMKTVKATKSAKAKKIKKAA 417
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo4g03009 417 MobiDBLite consensus disorder prediction 300 317 - -
Pumo4g03009 417 MobiDBLite consensus disorder prediction 261 332 - -
Pumo4g03009 417 SUPERFAMILY Ribosomal protein L1 32 240 IPR023674 -
Pumo4g03009 417 Gene3D - 84 177 IPR016095 -
Pumo4g03009 417 CDD Ribosomal_L1 11 239 IPR028364 -
Pumo4g03009 417 MobiDBLite consensus disorder prediction 261 283 - -
Pumo4g03009 417 MobiDBLite consensus disorder prediction 318 332 - -
Pumo4g03009 417 PANTHER RIBOSOMAL PROTEIN L7AE FAMILY MEMBER 13 234 - -
Pumo4g03009 417 FunFam Ribosomal protein L1p/L10e family 85 176 - -
Pumo4g03009 417 Pfam Ribosomal protein L1p/L10e family 31 235 IPR028364 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo4g03009 128 230 Cytoplasmic Ribosomal Protein Gene Family AT2G27530 30.097 3.94e-09 54.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo4g03009 K14775 - gmx:100782862 599.742