Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo4g02998 ATGAAATCTGGCAGAGAGAAAGAGAACGATCGCTGCATCAGTTCGCATATGCAGACCCTCCATCGCCGTCTTCTCCACGCCTTAAACCTTGGCACCAGACATTTTGATGAGAAGACAAATAGATGGAAGTGGCAGTGTGCCAACATTGAAGTGCAGAAAAATGTGCTACGATCAATTGGTGCGTTTCTTGATTCATTATCAGGAGATGCACGTGCAGCACGTCATGCAATTGTTAAGGAATCTGTTGCCGATATTTTGGGAGCATTATTATGGATTCTTCAATGCAAAAGTGAGGCCTTGTTAAGCATGGCATCAAATGTGGCAGTGAAGTTAGTTAGTGTTATACCTAGTCCATTATTGCAATCATTTATGTTGGATCTTGTTTATTGTCTGTCGTCCTTGCTATCTTCGCATCAAGTAGAAGTTGCAATACCCTGTGCTACTGCTTTGAATTTGGTAATCTCAAATTTGAGTGCTACAAGTGAGAAGGCAGTTATGGAAGCATTGAAAGAAACAGAGACTTCCATTTGTATTGTTGGAAATATAAAAGATTTTGCTGAAGGTGCAAAGAAAATTGAATATTTTGAAGAGATGACTTTACTTTTGAGCACAATACTGTGGCGCTGGCCTCCATCTAGGTTCCCTGTTGGTAACGATGCTATACTTATGAAAGGTTTAGCAAACATCCATACAAGGACAGATAGTTCTATTAAACTTGCACTTTTAAAGCTGTACACGTCTTTAGCTTTGTGTGATTCTGTAGCAAGAAAACTTATAGAGGATGGAGAAGTATTTCCTCAAATGTTTGTGCAGGCGATGGGAAAATCAAACCCTCTTGCTGTTCGGATAGAGGGGTTTAGGCTTGCTCAATGTCTATTGAGATCCCAAGAGAATTGTTTAAAAGTGGTTGGTTTGTGTGGTGAAGCTCTTGTTGATGCCATAATTTGTGGGATGAGAGAAACTGGGCTTAGTTCTAAAAAAATTGGGAGCAACCATGGGTCTTTGTCAGTGGAAGCATGCCAGTTGGCTCTAATAACTCGCTGGGCAGGTGATCATCATATTAATTTTTGGAAACAAGGAATTGATAGAGTCCTCCTTAATCTTCTGATTGAAAATATTCATGGCCAATTGTGTGAACCTGTCTTGTCATTGGATAAACAAATATCCATGGTGAAAGAGAGATTAAAAGCCAATTATCATCTTGGTCTTAGGAGTTATCTGTGGGACATTCTTGGGTGGCTTACTATTCATTGTGGAGAAAATTTAAACCCTTATACTCATGGAAGAGAACTCTGCATCAACTTACTAATTACATGTGCATGCTTGAGTTTTGTGGATACACTTGAAAAATGGTGCCGAATATGTCAAAAGGATATTGATGATCATTTTCAAAGTGAACCAGTATCAAGGGCTGTTCTAATGATGATTCATTCTCCATGTAATTCCATCTCCTCACATGCTAGATTCTTATTATTAGATGTACTGAAGGTGAAAGGCATGTCCTGCTTGAAAAGCTTAATACATACTCTAGATTATACATCATCCTTAGAAAGCTATGGATCATTTGATAAACTTCAACTGGTTATTAACTTAATTGGGTTGACTTGTCTTTCAAGTTTACCAGAGTATCAAAGATGTATCATAGAGAGCAAAGGGATAAAGGCAATTGTTCTTCTTGTGAAACGATGCTTAAGTAATGACATTCATGTAGAAAGGCAAAACTTCGCTCCTCATTTGCATACAACATTCCAGGAAAGGTCTTGTTGCTGTATTGATAAAGAAGATTGGGAAGGTTCCAATGTTCTCTTATTTTATAGTTTGTTGGGATTGGCTGAAATTCTTCATCAGTGTGACCTTCTACAAGATAATCCTCAGCAATTTTCTAGAGAGGTGACAAATATTAGAGCTCAGTTAGTTAGCAAACTTCACGAGATCTGTAGTGGCAACTCTTTCAGTCCTGGAGTGAGATGGTATGTTTCGTATATTCTAACTTCTTTTGGATTTTACGGTTTCCCAAATGAATTAGCCAAAAGGATTGGGAAATCTCTCAATAAGGAAGAATACTCAGATATGCGGCTCATTGTAGCAAATGGGGTTTCTGTGAGTGTTCATGGTGTTATTCTTGCTGTTCGATGTCCATCACTGCTGCCTCCTCGATTGTTACCTAGTATGAAGAGTTCTGAAGAGGTAACAGATAAGTTTGTCAGAGAGACCATGAGAGAAGTTCAATTATCTTCTCATGTTGATTATGAAGCATTGGTGTTGTTGTTGGAATATGTGTACTTGGGATGCTTACATGCAGGAGAAGAAACAGTGAAGAAGCTGAAAATTCTTGCTAAGCGCTGCAAACTACAGCCTCTCTTGCAAATGCTTTATAGACAACGTCCAACATGGGGCACACTTTTCCCCAGCTTTAATCTTACTTCATCTCTTGGTTCAGCCAGAAGTTGTTTTTCGGATGTCATATTGGAAGCTAAATCAAATAAACTTGTTGGGTGGACATGCAATATTTGTTCTGACACAGTACCCCATATGCATGTTCACAAAGTTATATTGCAGTCTGGTTGTGATTATTTACAAGGTTTATTCCGGTCAGGAATGCAAGAAAGTCATTCACAAGTCATAAAAGTTGATATTAGCTGGGAAGCGTTGATTAAACTAGTGCAGTGGTTTTATTCTGATGAGCTGCCTAATCCTCCCTCTGGATGCTTGTGGGATAATATGGATGATGAAGAAAAGCTATTTAATCTACAACCATATGTGGAGCTTTGTTGGCTTGCTGAGTTCTGGATTTTGGAAAATATTCAGGAAGCCTGCTGGAATGTGATTATGTCTTGTCTTGATTCTTCCAGGCAGTTGTCCATTAAAATAATCAAAATGGCATATAATCTCTCTTTGTGGAAGTTGGTTGACATTGCAGCAAATCTCATGGCTCCTTCATATCGTCAGTTACAAAATTCTGGTGAACTTGAAGAATTTGATGATGCGCTAGTGCACTTAATTTATTCTGCTTCTATTCAACTTAACCAAGAAGGCAAAAATTGCTTTAGGTGA 3054 0.3851 MKSGREKENDRCISSHMQTLHRRLLHALNLGTRHFDEKTNRWKWQCANIEVQKNVLRSIGAFLDSLSGDARAARHAIVKESVADILGALLWILQCKSEALLSMASNVAVKLVSVIPSPLLQSFMLDLVYCLSSLLSSHQVEVAIPCATALNLVISNLSATSEKAVMEALKETETSICIVGNIKDFAEGAKKIEYFEEMTLLLSTILWRWPPSRFPVGNDAILMKGLANIHTRTDSSIKLALLKLYTSLALCDSVARKLIEDGEVFPQMFVQAMGKSNPLAVRIEGFRLAQCLLRSQENCLKVVGLCGEALVDAIICGMRETGLSSKKIGSNHGSLSVEACQLALITRWAGDHHINFWKQGIDRVLLNLLIENIHGQLCEPVLSLDKQISMVKERLKANYHLGLRSYLWDILGWLTIHCGENLNPYTHGRELCINLLITCACLSFVDTLEKWCRICQKDIDDHFQSEPVSRAVLMMIHSPCNSISSHARFLLLDVLKVKGMSCLKSLIHTLDYTSSLESYGSFDKLQLVINLIGLTCLSSLPEYQRCIIESKGIKAIVLLVKRCLSNDIHVERQNFAPHLHTTFQERSCCCIDKEDWEGSNVLLFYSLLGLAEILHQCDLLQDNPQQFSREVTNIRAQLVSKLHEICSGNSFSPGVRWYVSYILTSFGFYGFPNELAKRIGKSLNKEEYSDMRLIVANGVSVSVHGVILAVRCPSLLPPRLLPSMKSSEEVTDKFVRETMREVQLSSHVDYEALVLLLEYVYLGCLHAGEETVKKLKILAKRCKLQPLLQMLYRQRPTWGTLFPSFNLTSSLGSARSCFSDVILEAKSNKLVGWTCNICSDTVPHMHVHKVILQSGCDYLQGLFRSGMQESHSQVIKVDISWEALIKLVQWFYSDELPNPPSGCLWDNMDDEEKLFNLQPYVELCWLAEFWILENIQEACWNVIMSCLDSSRQLSIKIIKMAYNLSLWKLVDIAANLMAPSYRQLQNSGELEEFDDALVHLIYSASIQLNQEGKNCFR 1017
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo4g02998 1017 ProSiteProfiles BTB domain profile. 689 769 IPR000210 GO:0005515
Pumo4g02998 1017 CDD BTB_POZ_ZBTB_KLHL-like 818 896 - -
Pumo4g02998 1017 SUPERFAMILY POZ domain 668 791 IPR011333 -
Pumo4g02998 1017 Gene3D Potassium Channel Kv1.1; Chain A 813 987 IPR011333 -
Pumo4g02998 1017 Gene3D - 21 332 IPR011989 -
Pumo4g02998 1017 SUPERFAMILY POZ domain 843 944 IPR011333 -
Pumo4g02998 1017 SUPERFAMILY ARM repeat 48 688 IPR016024 -
Pumo4g02998 1017 SMART BTB_4 819 947 IPR000210 GO:0005515
Pumo4g02998 1017 SMART BTB_4 689 799 IPR000210 GO:0005515
Pumo4g02998 1017 ProSiteProfiles BTB domain profile. 819 900 IPR000210 GO:0005515
Pumo4g02998 1017 PANTHER OS06G0674800 PROTEIN 5 1012 IPR044953 -
Pumo4g02998 1017 Pfam BTB/POZ domain 844 909 IPR000210 GO:0005515
Pumo4g02998 1017 Pfam BTB/POZ domain 681 789 IPR000210 GO:0005515
Pumo4g02998 1017 Gene3D Potassium Channel Kv1.1; Chain A 671 794 IPR011333 -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TRAF Pumo4g02998 BTB 2.1e-07 CL0033
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo4g02998 - - gmx:100786565 1829.3