Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo4g02986 ATGATGACGAAAGTGAAGTATGGACCAATGATATTGTCCAAGAAGACGAAGGCTAAGCTGTTGAATCATCTGAAGGACCTCAAGGCCGAGCTTGCCTTGCTTTGTGTTGCTAAGGTCACCGGCGATGCCCCTAACAAGCTCTCCAAGATAAAGGTGGTGAGGTTGTTGATTGCGCAGGTTTTGACGGTGATTTCTCATAAGCAGAAGGTTGCATTGAGGGATGCCTACAAGAAGAAAAAGTACTTGCCTCTTGATCTCTGCCCTAAGAAGACCAGGGCTATCCGTAGGAGGCTTACTAAGCATCAGGTTTTAAAAACATTGAGGAATGTTAAATCGAGGAAAAATGCAAAATCTACTTCAATGAGCAACAATGAAAATGATAAAAGCTTGAGCCTCCAATGGCATAGCTGGTTTTCACAGAGTGACTCTAATGCTTATCTGGAGCCAAATGGAAGGGCATCAAAAGATCTTGCACCTCCCAATTTGCATAGAAAATCAAGAGCAACTACTGGTCCTGACACTGATCCATAG 531 0.435 MMTKVKYGPMILSKKTKAKLLNHLKDLKAELALLCVAKVTGDAPNKLSKIKVVRLLIAQVLTVISHKQKVALRDAYKKKKYLPLDLCPKKTRAIRRRLTKHQVLKTLRNVKSRKNAKSTSMSNNENDKSLSLQWHSWFSQSDSNAYLEPNGRASKDLAPPNLHRKSRATTGPDTDP 176
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo4g02986 176 PANTHER 60S RIBOSOMAL PROTEIN L35 12 117 IPR045059 GO:0000463|GO:0022625
Pumo4g02986 176 Gene3D - 2 80 IPR036049 GO:0003735|GO:0005840|GO:0006412
Pumo4g02986 176 NCBIfam 50S ribosomal protein L29 13 67 IPR001854 GO:0003735|GO:0005840|GO:0006412
Pumo4g02986 176 Gene3D - 81 124 - -
Pumo4g02986 176 MobiDBLite consensus disorder prediction 158 176 - -
Pumo4g02986 176 MobiDBLite consensus disorder prediction 145 176 - -
Pumo4g02986 176 FunFam 60S ribosomal protein L35 2 80 - -
Pumo4g02986 176 Pfam Ribosomal L29 protein 12 67 IPR001854 GO:0003735|GO:0005840|GO:0006412
Pumo4g02986 176 SUPERFAMILY Ribosomal protein L29 (L29p) 12 68 IPR036049 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo4g02986 Pumo-Chr4 58075896 58078796 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo4g02986 12 111 Cytoplasmic Ribosomal Protein Gene Family AT2G39390 76.238 8.61e-41 132
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo4g02986 K02918 - gmx:100306624 152.91