Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo4g02980 ATGGAAGGGATTAAAATCGTCTCCGGTTACCGGACAGCTCCAGTAGAAGAGAGAAAGACCTACCGGAGAGAAGCTGGACTCCTATGGAAGACAGTCATTATAACCCAACTGCAAAAACTCGTACATGTTTCTATAAATGGAAAGTCTACCCTCACTGATTCTCTTGTGGCTGCTTCTGGTAATATCATAGCACAAGAGGGTGAAGCTGAGCTTGGCAACACTGTCAAATCCTCTGGTATCTCTCTCTACTATGCGATGCCTGAGGGTGATTTGAAGAATTTCCAAGGAGAACGTGAAGGAAATGAGTTCCTTATAAATCTCCTTGACTCACCTGGGCATGTGGACTTCTCATCTGAGGTCACAGCCGCACTTCGCATCACTGATGGAGCACTTGTGGTGGTGGATTGTGTTGAGGGTGTCTGTGTCCAGACAGAAACTGAGCTGAGACAAGCCCTTGGAGAAAGGGTTAAGCCTGTTTTGGCACTTAACAAGATGGATAGGTGCTTCCTTGAGCTAAACCTTGATCCAGAGGAGGCATACCAAACACTCCAAAGGGTTGTTGAGAGTGTGAATGTGATCATGGCAACCTATGAAGATGCTCTACTTGGTGATGTTAAGGTGTGCCCTGAGAAGGGAACGGTTGCTTTTTCTGCTGGCTTGCATGGATGGGGCTTTACACTCACCAACTTTGCCAAGATGTATGCTTCCAAGTTTGGAGTTGATGAGGCAAAGATGATGAGTAGGCTTTGGGGTGAGAACTTCTTTGACTCTGCTACCAAAAAGTGGACAAACAAACAAGCACACTGGGGCTTCTACTTGCAAGCGTGGCTTTGTTCAGTTTTGTTATGA 849 0.4617 MEGIKIVSGYRTAPVEERKTYRREAGLLWKTVIITQLQKLVHVSINGKSTLTDSLVAASGNIIAQEGEAELGNTVKSSGISLYYAMPEGDLKNFQGEREGNEFLINLLDSPGHVDFSSEVTAALRITDGALVVVDCVEGVCVQTETELRQALGERVKPVLALNKMDRCFLELNLDPEEAYQTLQRVVESVNVIMATYEDALLGDVKVCPEKGTVAFSAGLHGWGFTLTNFAKMYASKFGVDEAKMMSRLWGENFFDSATKKWTNKQAHWGFYLQAWLCSVLL 282
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo4g02980 282 Gene3D - 40 242 IPR027417 -
Pumo4g02980 282 PRINTS GTP-binding elongation factor signature 122 133 IPR000795 GO:0003924|GO:0005525
Pumo4g02980 282 PRINTS GTP-binding elongation factor signature 70 78 IPR000795 GO:0003924|GO:0005525
Pumo4g02980 282 PRINTS GTP-binding elongation factor signature 106 116 IPR000795 GO:0003924|GO:0005525
Pumo4g02980 282 PRINTS GTP-binding elongation factor signature 158 167 IPR000795 GO:0003924|GO:0005525
Pumo4g02980 282 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 47 268 IPR027417 -
Pumo4g02980 282 ProSiteProfiles Translational (tr)-type guanine nucleotide-binding (G) domain profile. 47 259 IPR000795 GO:0003924|GO:0005525
Pumo4g02980 282 FunFam Translation elongation factor 2 25 242 - -
Pumo4g02980 282 PANTHER TRANSLATION ELONGATION FACTOR-RELATED 41 267 - -
Pumo4g02980 282 Pfam Elongation factor Tu GTP binding domain 46 226 IPR000795 GO:0003924|GO:0005525
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo4g02980 Pumo-Chr4 57992294 57994232 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo4g02980 34 265 Eukaryotic Initiation Factors Gene Family AT1G56070 73.361 2.59e-119 359
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo4g02980 K03234 - gmx:100790826 411.764