Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo4g02973 ATGGATAGTGAATTTTGGAGCAGTGACACGATGAGAGATTTTACTTCGGCAGTTGACAGTGCGATAAGGAGCGAGACTGCATCAAGTTTGGGGGCATCCCCTATCCGTAGTTTTGCTTCGGTAGTGGACAGTGCCATAAGGAGTGAGGCTGCGTCAAATTTGGGAGCATATAGTTATGCTTCGGCGGTGTCGAATCGGACAAGACATGTTGTTGCACGAGTATTCACCCGGGCAGAGCTTAAAAAAGCCACCGAAAATTTCTCAGTTGAAAACAAGATTGGTGCTGGAAACTTTGCTGTTGTGTACATAGGCAAACTCCTTGGTGATCGTGAGGTGGCAATCAAGAGGGGCGAAAGTATCTGGTTCAATCTTTGCGCATTTAAGTCTGAATTGGCCTTCTTGTCCCGCCTGCACCACAGGAACTTGGTTGGACTAGTTGGCTTCTGTAAAGAGAAAAATGATAGGCTCTTGGTGTACGAGTACATGGAAAATGGATCGTTGTATTATCATTTGCATGACAAGAACAATGTGGACAAGCGTAGCAGTGTGTTGAATTATTGGAAAATGAGGATCAAGATTGCTTTGGATGCTTCCCGGGGAATAGATCATCTTCATAACTGCGCAGTTCCGTCTATTATTCACAGACGTATCAAGTCTTCCAATATTCTTATTGATGGCACTTGGACGGCAAAAGTATCTGATTTTCGATTGTCGTTCATGAGTCCAGATCAACCTGACCCTGATTATCCTTCAAAGGACATAAGGGGATCCTTTGGATACTCAGATCCTGAGTACTTTCGACTAAATGTGGTGACAACAAAGAGTGATGATGTGTATGGGTTTGGAGTTGTACTGCTTGAACTTTTAACGGGAAAGACAGAAGTATTCAAGTCTAGGGAAGATATAGGCACCCCATTGGTGTACTTTGCAGTGCCTGCTATTTTGGCTGGAGAATTGGTGAAAATTTTGGATCCAAGGATTCGACCACCCGATGTGAATGAAGTAGTGGCACTGGAGTTAGTGGCCAAAACAGCTATCCTTTGTGTGAGTTTGAAAGAGAAAGATAGACCAACCATGGTTGACATTGCGCTCATTTTGGAGCAGGCTTTGGATATTTGTGATAGTATCTCATATGATATCCTTTCCAGCCGTAATGTTTCAATGATATATTTAGAAAACCAATAA 1185 0.4304 MDSEFWSSDTMRDFTSAVDSAIRSETASSLGASPIRSFASVVDSAIRSEAASNLGAYSYASAVSNRTRHVVARVFTRAELKKATENFSVENKIGAGNFAVVYIGKLLGDREVAIKRGESIWFNLCAFKSELAFLSRLHHRNLVGLVGFCKEKNDRLLVYEYMENGSLYYHLHDKNNVDKRSSVLNYWKMRIKIALDASRGIDHLHNCAVPSIIHRRIKSSNILIDGTWTAKVSDFRLSFMSPDQPDPDYPSKDIRGSFGYSDPEYFRLNVVTTKSDDVYGFGVVLLELLTGKTEVFKSREDIGTPLVYFAVPAILAGELVKILDPRIRPPDVNEVVALELVAKTAILCVSLKEKDRPTMVDIALILEQALDICDSISYDILSSRNVSMIYLENQ 394
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo4g02973 394 Gene3D Phosphorylase Kinase; domain 1 50 161 - -
Pumo4g02973 394 ProSitePatterns Protein kinases ATP-binding region signature. 93 115 IPR017441 GO:0005524
Pumo4g02973 394 ProSiteProfiles Protein kinase domain profile. 87 370 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo4g02973 394 PANTHER SERINE/THREONINE-PROTEIN KINASE-LIKE PROTEIN CCR4 68 376 IPR044815 GO:0004674
Pumo4g02973 394 Pfam Protein tyrosine and serine/threonine kinase 89 362 IPR001245 GO:0004672|GO:0006468
Pumo4g02973 394 SUPERFAMILY Protein kinase-like (PK-like) 64 366 IPR011009 -
Pumo4g02973 394 Gene3D Transferase(Phosphotransferase) domain 1 162 379 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo4g02973 Pumo-Chr4 57795525 57797063 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo4g02973 72 382 Receptor kinase-like Gene Family AT3G55950 56.928 3.26e-104 324
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CR4L Pumo4g02973 PK_Tyr_Ser-Thr 1.6e-32 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo4g02973 - - gmx:100805573 409.068