Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo4g02971 ATGTGTCGCAGTGAAGCAGTATGTATATCTCCACGCCTCCTCCAAAGCACATACTTTGGCAATCAAATGGATAGTGAATTTTGGAGCACCGACATGAGAGATTTTTGTTGGGCAGTTGACAGTGCGATAAGGAGCGAGACTGCGTCAAGTTTGGGAGCATCCTCAGTCCGTAGTTTTACTTCGGTGGTGAACAGTGCCATAAGGAGTGAGACTGCATCAAATTTGGGAGCATTCCGTGTCTATAGTTTTGCTTCGGCGGTGTCGGATCGGACAGGACATGTTGCTCCACGAGTATTCACACTAGCTGAGCTTGAAGCAGCCACCAACAATTTCTCACTTGAATACAAGATTGGTGCTGGAAACTTTGCTGTTGTGTACAGAGGCAAACTCGTTGATGGTCGTGAGGTGGCAATCAAAAGGGGTGTAAGTATCTGGTTCAATCTTCGTGTATTTGAGTCTGAATTAATATTGACCTTCTTGTCCCGCCTACGCCACAAGAACTTGATTGGACCAGTTGGGTTCTGTAAAGGGACAGATGAGAGGCTCTTGGTGTATGAGTACATGAGGAATGGGTCGTTGTATTATCATTTGCATGGCAAGAACAATGTGGTCAAGGGTAGCAGTGTGTTGAATTATTGGAAAATGAGGATCAGGATTGCTTTGGATGCTTCCCGGGGAATAGAATATCTTCATAACTGTGCAGATCCGTCTGTTATTCACAGACATATCAAGTCTTCCAATATTCTTATTGATGGCGCTTGGACGGCAAGAGTATCTGATTTTGGACTGATTGTCGGTGATGAGTCCAGAACCTGA 816 0.4498 MCRSEAVCISPRLLQSTYFGNQMDSEFWSTDMRDFCWAVDSAIRSETASSLGASSVRSFTSVVNSAIRSETASNLGAFRVYSFASAVSDRTGHVAPRVFTLAELEAATNNFSLEYKIGAGNFAVVYRGKLVDGREVAIKRGVSIWFNLRVFESELILTFLSRLRHKNLIGPVGFCKGTDERLLVYEYMRNGSLYYHLHGKNNVVKGSSVLNYWKMRIRIALDASRGIEYLHNCADPSVIHRHIKSSNILIDGAWTARVSDFGLIVGDESRT 271
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo4g02971 271 Gene3D Phosphorylase Kinase; domain 1 80 187 - -
Pumo4g02971 271 Gene3D Transferase(Phosphotransferase) domain 1 188 270 - -
Pumo4g02971 271 ProSitePatterns Protein kinases ATP-binding region signature. 117 139 IPR017441 GO:0005524
Pumo4g02971 271 SUPERFAMILY Protein kinase-like (PK-like) 89 264 IPR011009 -
Pumo4g02971 271 SMART tyrkin_6 111 271 IPR020635 GO:0004713|GO:0006468
Pumo4g02971 271 Pfam Protein tyrosine and serine/threonine kinase 113 264 IPR001245 GO:0004672|GO:0006468
Pumo4g02971 271 PANTHER SERINE/THREONINE-PROTEIN KINASE-LIKE PROTEIN CCR4 95 264 IPR044815 GO:0004674
Pumo4g02971 271 ProSiteProfiles Protein kinase domain profile. 111 271 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo4g02971 Pumo-Chr4 57746159 57747861 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo4g02971 99 263 Receptor kinase-like Gene Family AT3G55950 62.353 2.30e-64 213
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CR4L Pumo4g02971 PK_Tyr_Ser-Thr 1.1e-20 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo4g02971 - - gmx:100805031 255.373