Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo4g02952 ATGCGAAGCTGCATCAACCTCTGGATCGTGCTGGCACTCGTCGTCCCTGTGCTCCTCTCTCTCAGAAGCCCTCGAGGAGAAACCGAAACCAAAACCACTTCTTCGTTCTCGGATTCTTCTTTCTCTGTGAAGCTTGCAAACTCCTTCCCTTTCAACCAAAGGATCCGAGATGGGTCGAATCTCGAATACGATTTCTATAGGGACACGTGTCCCCAAGCGGAGGGCATTGTCCGTTCATCTCTCACTCGCATCTACTTCGACCACAGGGACGTTGCACCTGCTCTGCTTCGTCTCTTCTTCCACGATTGCTTCATCGAGGGGTGTGATGCTTCGTTGCTGTTGGAAGAGAACAATGGTGATAGAAACCGTTCTGTGGAGAAGCAGGCTGTGCCAAATCAGACATTGAGAGGTTTTGACAAAATTGACACGATCAAGGAGGAGGTGGAGCAAGCATGTCCTGGGGTTGTGTCTTGTGCTGACATACTTGCTCTTGCGGCAAGAGATTCCATTCTTCTGGCTGGTGGGCCTTTCTACCCAGTTTTAACAGGCAGAAGGGATAGTCATCAATCATTTTTCGAGGAAGCAACTGATCAGATTCCCAGACCTGATGATAACGTTACACGCACACTGCATCTCTTCAATCTCAGAGGATTTAATGCAAGAGAAACAGTCAGCCTTCTTGGTAGAGGACACAACATTGGCAAAATTGGCTGTGACTTCATCCAGCAAAGGCTGTACAACTTTCAAGGCACAGGACAGCCAGACCCCAGCATACCGCTCGATTTCCTTCGCCAGATGAGGTTAAACTGCCCTGACACCAAGAATACCAGCAGCACCAGCACCAGTGTAGATGATGAGTTCATAATCTCAAAGCCAATGAGCAGTGATGTTCACTCCAAAATGGGGATGTCATACATGCAAGCACTGTCATCTTCAGTGTCATCAGGAGCATCATTTGACACTCACTACTACCAGAGCCTGCTGAGAGGAAGAGGGCTTCTTTTTGCTGATCAGCAGCTCATGGCTCAGGAGAAAACTGCCAGATTGGTCTCTGCTTATGCTTCAGATGATGGATCAACCTTTCGCATGGACTTTGCCAGGGTCATGCTGAAAATGTCCAATCTTGATGTTCTCACTGGACTTCAGGGTCAGGTTCGAGTCAATTGCTCCCAGCCTGTGACTTCTTAA 1188 0.4848 MRSCINLWIVLALVVPVLLSLRSPRGETETKTTSSFSDSSFSVKLANSFPFNQRIRDGSNLEYDFYRDTCPQAEGIVRSSLTRIYFDHRDVAPALLRLFFHDCFIEGCDASLLLEENNGDRNRSVEKQAVPNQTLRGFDKIDTIKEEVEQACPGVVSCADILALAARDSILLAGGPFYPVLTGRRDSHQSFFEEATDQIPRPDDNVTRTLHLFNLRGFNARETVSLLGRGHNIGKIGCDFIQQRLYNFQGTGQPDPSIPLDFLRQMRLNCPDTKNTSSTSTSVDDEFIISKPMSSDVHSKMGMSYMQALSSSVSSGASFDTHYYQSLLRGRGLLFADQQLMAQEKTARLVSAYASDDGSTFRMDFARVMLKMSNLDVLTGLQGQVRVNCSQPVTS 395
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo4g02952 395 PRINTS Plant peroxidase signature 94 114 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pumo4g02952 395 PRINTS Plant peroxidase signature 326 343 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pumo4g02952 395 PRINTS Plant peroxidase signature 222 234 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pumo4g02952 395 PRINTS Plant peroxidase signature 367 380 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pumo4g02952 395 PRINTS Plant peroxidase signature 136 149 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pumo4g02952 395 PRINTS Plant peroxidase signature 70 89 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pumo4g02952 395 PRINTS Plant peroxidase signature 174 189 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pumo4g02952 395 PRINTS Plant peroxidase signature 155 165 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pumo4g02952 395 PRINTS Plant peroxidase signature 310 325 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pumo4g02952 395 PANTHER PEROXIDASE 25-RELATED 21 380 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pumo4g02952 395 SUPERFAMILY Heme-dependent peroxidases 61 391 IPR010255 GO:0004601|GO:0006979|GO:0020037
Pumo4g02952 395 CDD secretory_peroxidase 60 390 IPR033905 GO:0004601|GO:0042744
Pumo4g02952 395 ProSitePatterns Peroxidases active site signature. 92 103 IPR019794 GO:0004601
Pumo4g02952 395 Gene3D - 65 390 - -
Pumo4g02952 395 Pfam Peroxidase 77 356 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pumo4g02952 395 ProSiteProfiles Plant heme peroxidase family profile. 60 393 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pumo4g02952 395 PRINTS Haem peroxidase superfamily signature 174 186 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pumo4g02952 395 PRINTS Haem peroxidase superfamily signature 92 106 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pumo4g02952 395 PRINTS Haem peroxidase superfamily signature 156 173 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pumo4g02952 395 PRINTS Haem peroxidase superfamily signature 312 327 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pumo4g02952 395 PRINTS Haem peroxidase superfamily signature 223 238 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pumo4g02952 395 FunFam Peroxidase 64 209 - -
Pumo4g02952 395 Gene3D Peroxidase, domain 2 200 373 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo4g02952 Pumo-Chr4 57224778 57227658 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo4g02952 3 391 Peroxidase AT4G33870 44.221 8.79e-104 311
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo4g02952 K00430 - gmx:100804973 686.411