Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo4g02951 ATGGCCTCTGCCACTGCCACCACTCTCTTCTCCTCTAACCCCATGTTTTCCACTGACCACCACTCTCTCTCTCCCTCTCCAACCATTCCCAAATCCTTCACTGGACTCTGCAAGCCCTTCCATTCAAGGGTTCCCACTTCCATCCCCTTCTTCCATTGCAGAAGACCCAAGTTCTTTGTCAGGGTCACTGTTATAAAGTGGAGATGTCCAAAGCAAACTCTGCCTCCCAATGATACCGGTTTCCAAAAGAAACTCCTGTATCTGGAATCCATCGGTATTGACTCTTTCTCGCTTATTGAAAACCATCCAACGCTGATCACAACCCCTCTTGCTGACATAAGATCCACCGTGGATTACATTACCTCCTTGGATTTCACCGCAATTGAGTTTCGGCGTATGGTTGGCATGTGCCCTGAGATTCTGACCACCCAAGTCTCAGACATCATACCTGTCTTCACCTTCCTTCATCGCGAGGTTCATGTGCCTGGCTCGGATATTAAGCGGGTAATAAATCGTCGCCCCAGGTTGCTTGTCTGCAGTGTTAGTAAGCGACTCCGTCCCACCCTATACTTCCTCCAAAGTATTGGCATAGAAGAGGTAAATAGGCACACTGACTTGCTATCATGTAGTGTTGAAGAAAAGTTCATGCCCAGGATTGATTACTTTGAGAATATCGGGTTTTCTCGCCGCGATGCAACTTCAATGTTCCGAAGATTTCCTCAGCTGTTTTGTTATAGTATTAAAAACAACTTGGAGCCTAAATACAGTTACTTTGTGGTGGAGATGGGAAGAGATTTGAAGGAGCTGAAAGAGTTTCCTCAGTATTTCTCATTTAGCCTAGAGAATAGGATTGAGCCTAGGCATAAAAAGTGTGTAGAAATGGGGGTGTGTTTTCCTCTCCCTGCCTTGTTAAAAACAAGTGAAGTGAAATTTCAAAGTAGATTAGATGTATGTGTAAATTCTTCAACACCCTTGAAAACATCCCCTCTGTGGTGTGCTGGCTGTGATGTTTATGATGTATAG 1023 0.4487 MASATATTLFSSNPMFSTDHHSLSPSPTIPKSFTGLCKPFHSRVPTSIPFFHCRRPKFFVRVTVIKWRCPKQTLPPNDTGFQKKLLYLESIGIDSFSLIENHPTLITTPLADIRSTVDYITSLDFTAIEFRRMVGMCPEILTTQVSDIIPVFTFLHREVHVPGSDIKRVINRRPRLLVCSVSKRLRPTLYFLQSIGIEEVNRHTDLLSCSVEEKFMPRIDYFENIGFSRRDATSMFRRFPQLFCYSIKNNLEPKYSYFVVEMGRDLKELKEFPQYFSFSLENRIEPRHKKCVEMGVCFPLPALLKTSEVKFQSRLDVCVNSSTPLKTSPLWCAGCDVYDV 340
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo4g02951 340 Pfam mTERF 163 312 IPR003690 GO:0003690|GO:0006355
Pumo4g02951 340 Pfam mTERF 65 166 IPR003690 GO:0003690|GO:0006355
Pumo4g02951 340 SMART mt_12 96 126 IPR003690 GO:0003690|GO:0006355
Pumo4g02951 340 SMART mt_12 167 198 IPR003690 GO:0003690|GO:0006355
Pumo4g02951 340 SMART mt_12 233 265 IPR003690 GO:0003690|GO:0006355
Pumo4g02951 340 SMART mt_12 266 297 IPR003690 GO:0003690|GO:0006355
Pumo4g02951 340 SMART mt_12 131 162 IPR003690 GO:0003690|GO:0006355
Pumo4g02951 340 SMART mt_12 199 228 IPR003690 GO:0003690|GO:0006355
Pumo4g02951 340 FunFam Transcription termination factor MTEF1, chloroplastic 155 319 - -
Pumo4g02951 340 PANTHER CGI-12 PROTEIN-RELATED 97 315 IPR003690 GO:0003690|GO:0006355
Pumo4g02951 340 Gene3D Transcription termination factor 3, mitochondrial 137 319 IPR038538 -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Pumo4g02951 mTERF 6.1e-32 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo4g02951 K15032 - gmx:100794678 671.774