Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo4g02941 ATGAACACATTCACTTGCATACTCCTCTTCCTTTTCACCCTAACCTTTGTTAGATCCCTCACTTCACACAGCAGAAAAGCAAATCACAAGCTCCCACCAAGGCCTGTTGGTCTTCCCATAGTTGGAAACCTCCTCCAACTGGGTGCCAAGCCCCACCAAAGCTTGGCCACCCTAGCCAAGATTCATGGCCCAATAATGAGCTTGAAGCTGGGCCAAATCACCACCATAGTGATGTCCTCAGCTGAAATGGCCAAAGGGGTGCTTCAAATCCATGACCAGTTCTTATCAAACAGAAAAATCCCTGATGCAGTGAAAGATGCCAGTGTGGGACTTAGGCGCAAGAAGATTCAGGAGCTTTACAATGACATCCACCAAAGCAGCTTGACTGGTGAAGCTGTGGACATTGGAAGGTTGGCTTTCAAGACCATGATAAATTTGTTGTCAAACACGGTTTACTCGGAGGATTTGATTCACTCTACCGATAAGGCTGGGGAGTTGAAGGAGTTGGTGGCCAATATCATGAAAGTGGTTGGAAGGCCAAATGTGGCTGATTGTTTCCCAGTGTTGAAGGTGGTTGACTCTCATGGCATCAGAAGGCGCACGGGGAGATACTTTTGGAAGTTGTTGACCATATTTAAGTGCTTGGTTGACAAAAGGTTGAAGCTAAGGAAGAATGCTGATTACTGCACCAAAAATGACATGTTGGATGCCATTCTCAACAATGCTGAAGAGAACAATCGGCAGATTTATAGAGATAAGATTGAATGTTTGTCATTGGACTTGTTTCTGGCAGGAACAGATACAATAACGTTTACCGTAGAATGGGCAATGGCTGAGCTCCCTTACTTGCAAGCAATAGTGAAAGAGACTTTGAGGCTGCACCCAGCAGTTCCACTAGTGCCTAGAAAAGCTGAAGTGGAGTTGGAGATGCATGGCTACACAGTCCCAAAGGGTGCACAAGTGTTGGTTAATGTGTGGGCAATAGGTAGGGACCCAAATTTGTGGGACAATCCAAGTTTGTTTTGGCCAGAGAGGTTTTTAGGGTTAGAAATTGACTTCAAAGGAAGGAGTTTTGAGCTGAGCCCATTTGGGGCTGGGAGGAGGATATGTCCTGGCTTGCCATTAGCCATAAGATTGTTGTTCTTGATGTTGGGTTTGCTCATCAATTCCTTTGATTGGAAGCTTCAGGGTGGAACTCAACCAGAGGATATGAATATGGATGAAAAATTTGGACTAACCTTGGAGAAGGCTCAACCTGTGCTAGCTGTTCCAATCAAACCAAGCAATTAG 1290 0.4527 MNTFTCILLFLFTLTFVRSLTSHSRKANHKLPPRPVGLPIVGNLLQLGAKPHQSLATLAKIHGPIMSLKLGQITTIVMSSAEMAKGVLQIHDQFLSNRKIPDAVKDASVGLRRKKIQELYNDIHQSSLTGEAVDIGRLAFKTMINLLSNTVYSEDLIHSTDKAGELKELVANIMKVVGRPNVADCFPVLKVVDSHGIRRRTGRYFWKLLTIFKCLVDKRLKLRKNADYCTKNDMLDAILNNAEENNRQIYRDKIECLSLDLFLAGTDTITFTVEWAMAELPYLQAIVKETLRLHPAVPLVPRKAEVELEMHGYTVPKGAQVLVNVWAIGRDPNLWDNPSLFWPERFLGLEIDFKGRSFELSPFGAGRRICPGLPLAIRLLFLMLGLLINSFDWKLQGGTQPEDMNMDEKFGLTLEKAQPVLAVPIKPSN 429
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo4g02941 429 SUPERFAMILY Cytochrome P450 28 423 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo4g02941 429 Pfam Cytochrome P450 113 280 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo4g02941 429 Pfam Cytochrome P450 277 416 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo4g02941 429 Pfam Cytochrome P450 32 103 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo4g02941 429 PRINTS P450 superfamily signature 264 281 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo4g02941 429 PRINTS P450 superfamily signature 285 296 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo4g02941 429 PRINTS P450 superfamily signature 370 381 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo4g02941 429 PRINTS P450 superfamily signature 361 370 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo4g02941 429 Gene3D Cytochrome P450 23 278 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo4g02941 429 Gene3D Cytochrome P450 279 422 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo4g02941 429 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 363 372 IPR017972 GO:0005506|GO:0016705
Pumo4g02941 429 PANTHER CYTOCHROME P450, FAMILY 76, SUBFAMILY C, POLYPEPTIDE 5-RELATED 279 426 - -
Pumo4g02941 429 PRINTS E-class P450 group I signature 284 302 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo4g02941 429 PRINTS E-class P450 group I signature 370 393 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo4g02941 429 PRINTS E-class P450 group I signature 253 270 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo4g02941 429 PRINTS E-class P450 group I signature 59 78 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo4g02941 429 PRINTS E-class P450 group I signature 324 348 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo4g02941 429 PRINTS E-class P450 group I signature 360 370 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo4g02941 Pumo-Chr4 57034625 57046175 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo4g02941 7 426 Cytochrome P450 AT2G45550 41.650 2.02e-129 381
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo4g02941 - K23810 lja:Lj2g3v0039250.1 511.531