Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo4g02922 ATGATATTTGATTTGACTGCAAAAAAACTTATCAGTTGTGACTCGACCGAGACCTTAGAGAATTTAATGGACAACTTTGTTGCATTTATAGAAGGACTCATCTCGTTCCCTCTCAACATTCCAGGAACAGCTTATCACAAATGTATGCAGGGTAGGAAAAGGGCAATGAAGATGCTGAAGAACATGCTGCAGGAAAGAAAGGAAATGGCTAGGAAACAACAGAAGGATTTTTTTGATTATGTTCTAGAAGAACTTACCAAAGAGGGAACACTCCTCACTGAAGAGATAGCTCTGGACCTCATGTTTGCACTACTCTTTGCAAGCTTTGAAACCACTTCTCTGGCTCTCACTTATGGCATAAAAGCACTCTCTGATCATCCCTTGGTGCTCAAGCAATTACAAGAAGAACATGAAGCCATCCTCAAACAACGTGAGGATCCTAACTCCGGACTCACGTGGCAAGAATACAAATCAATGACATTTACACTTCACGTGTTCATAAATGAAACCATCAGACTCGCAAATATAGTTCCAGGAATTTTCCGGAAGGCACTAGAGGATATTAATTATGGGGAATACACCATACCAGCAGGCTGGGCAATCATGGTGTGTCCCCCAGCTGTACACTTGAACCCGGCCAAATATCATGATCCTCTTGCCTTCAATCCATGGAGATGGGAGGGAATGGAAATGAATGCTGCTAGCAAACATTTCATGGCTTTCGGTGGAGGCATGAGATTTTGTGTTGGGGCAGACTTCGCTAAGGTTCAGATGGCTGTTTTTCTTCATAAATTAGTAACAAAGTACAGGTGGCGACCCATCAAAGGAGGGAATATTGTTCGAACTCCTTGTTTACGATTTCCAGATGGCTTTTACGTTCGAATGACGGAGAAGGACCAATGGAAGTATGAATCAGAATAA 921 0.4224 MIFDLTAKKLISCDSTETLENLMDNFVAFIEGLISFPLNIPGTAYHKCMQGRKRAMKMLKNMLQERKEMARKQQKDFFDYVLEELTKEGTLLTEEIALDLMFALLFASFETTSLALTYGIKALSDHPLVLKQLQEEHEAILKQREDPNSGLTWQEYKSMTFTLHVFINETIRLANIVPGIFRKALEDINYGEYTIPAGWAIMVCPPAVHLNPAKYHDPLAFNPWRWEGMEMNAASKHFMAFGGGMRFCVGADFAKVQMAVFLHKLVTKYRWRPIKGGNIVRTPCLRFPDGFYVRMTEKDQWKYESE 306
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo4g02922 306 PANTHER CYTOCHROME P450 26 1 272 - -
Pumo4g02922 306 Pfam Cytochrome P450 22 283 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo4g02922 306 PRINTS P450 superfamily signature 107 124 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo4g02922 306 PRINTS P450 superfamily signature 165 176 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo4g02922 306 PRINTS P450 superfamily signature 248 259 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo4g02922 306 PRINTS P450 superfamily signature 239 248 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo4g02922 306 PRINTS E-class P450 group I signature 96 113 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo4g02922 306 PRINTS E-class P450 group I signature 164 182 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo4g02922 306 PRINTS E-class P450 group I signature 238 248 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo4g02922 306 PRINTS E-class P450 group I signature 116 142 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo4g02922 306 PRINTS E-class P450 group I signature 204 228 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo4g02922 306 PRINTS E-class P450 group I signature 248 271 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo4g02922 306 Gene3D Cytochrome P450 1 298 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo4g02922 306 Coils Coil 52 76 - -
Pumo4g02922 306 CDD CYP90-like 1 297 - -
Pumo4g02922 306 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 241 250 IPR017972 GO:0005506|GO:0016705
Pumo4g02922 306 SUPERFAMILY Cytochrome P450 16 297 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo4g02922 Pumo-Chr4 56581174 56584209 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo4g02922 1 298 Cytochrome P450 AT1G12740 72.697 1.29e-161 457
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo4g02922 - - gmx:100812089 509.99