Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo4g02918 ATGGAGAAATCCCAGTTGCAACGGAAAACTCCCACCAGGTTCATTGGGTTTGCCACTTGTTGGTATGGATCAATCTTCAAGACCAGCTTGATTGGACGACCAACTGTGGTGTCCACAGACCCGGAGTTTAATTACTTCATATTCCAACAAGAGGGACTAATGTTCCAGAGCTGGTACCCAGATACACTCACTAAGATTTTTGGGAGACAAAATTTAGGTTCCTTGCATGGTTTTCTGTTTAAGTACCTTAAGAACATGGTGCTCAATATGTTTGGTCCGGAAGGCGTGAAAAGGATGCTCTCAGAGGTTGAACAGAAAGCGTGTACAACATTACAGCAGTGGTCGTGTCAGGAAACTGTTGAGTTGAAGGCTGCAACAAAAAGGATGATATTTGATTTGACTGCAAAAAAACTTATCAGTTGTGACTCGACCGAGACCTTAGAGAATTTAATGGACAACTTTGTTGCATTTATAGAAGGACTCATCTCGTTCCCTCTCAACATTCCAGGAACAGCTTATCACAAATGTATGCAGGGTAGGAAAAGGGCAATGAAGATGCTGAAGAACATGCTGCAGGAAAGAAAGGAAATGGCTAGGAAACAACAGAAGGATTTTTTTGATTATGTTCTAGAAGAACTTACCAAAGAGGGAACACTCCTCACTGAAGAGATAGCTCTGGACCTCATGTTTGCACTACTCTTTGCAAGCTTTGAAACCACTTCTCTGGCTCTCACTTATGGCATAAAAGCACTCTCTGATCATCCCTTGGTGCTCAAGCAATTACAATTCATAAATGAAACCATCAGACTCGCAAATATAGTTCCAGGAATTTTCCGGAAGGCACTAGAGGATATTAATTATGGGGAATACACCATACCAGCAGGCTGGGCAATCATGGTGTGTCCCCCAGCTGTACACTTGAACCCGGCCAAATATCATGATCCCCTTGTCTTCAATCCATGGAGATGGGAGGGAATGGAAATGAATGCTGCTAGCAAACATTTCATGGCTTTCGGTGGAGGCATGAGATTTTGTGTTGGGGCAGACTTCGCTAAGGTTCAGATGGCTGTTTTTCTTCATAAATTAGTAACAAAGTACAGGTGGCGACCCATCAAAGGAGGGAATATTGTTCGAACTCCTGGTTTACGATTTCCAGATGGCTTTTACGTCCGCATAACGGAGAAGGACCAATGGAAGTATGAATCAGAATAA 1212 0.429 MEKSQLQRKTPTRFIGFATCWYGSIFKTSLIGRPTVVSTDPEFNYFIFQQEGLMFQSWYPDTLTKIFGRQNLGSLHGFLFKYLKNMVLNMFGPEGVKRMLSEVEQKACTTLQQWSCQETVELKAATKRMIFDLTAKKLISCDSTETLENLMDNFVAFIEGLISFPLNIPGTAYHKCMQGRKRAMKMLKNMLQERKEMARKQQKDFFDYVLEELTKEGTLLTEEIALDLMFALLFASFETTSLALTYGIKALSDHPLVLKQLQFINETIRLANIVPGIFRKALEDINYGEYTIPAGWAIMVCPPAVHLNPAKYHDPLVFNPWRWEGMEMNAASKHFMAFGGGMRFCVGADFAKVQMAVFLHKLVTKYRWRPIKGGNIVRTPGLRFPDGFYVRITEKDQWKYESE 403
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo4g02918 403 CDD CYP90-like 22 394 - -
Pumo4g02918 403 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 338 347 IPR017972 GO:0005506|GO:0016705
Pumo4g02918 403 Coils Coil 180 204 - -
Pumo4g02918 403 PRINTS P450 superfamily signature 262 273 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo4g02918 403 PRINTS P450 superfamily signature 336 345 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo4g02918 403 PRINTS P450 superfamily signature 345 356 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo4g02918 403 PRINTS P450 superfamily signature 235 252 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo4g02918 403 PANTHER CYTOCHROME P450 26 10 262 - -
Pumo4g02918 403 Pfam Cytochrome P450 19 262 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo4g02918 403 Pfam Cytochrome P450 262 378 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo4g02918 403 Gene3D Cytochrome P450 4 395 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo4g02918 403 PRINTS E-class P450 group IV signature 329 345 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo4g02918 403 PRINTS E-class P450 group IV signature 13 36 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo4g02918 403 PRINTS E-class P450 group IV signature 290 304 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo4g02918 403 PRINTS E-class P450 group IV signature 306 324 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo4g02918 403 PRINTS E-class P450 group IV signature 345 363 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo4g02918 403 SUPERFAMILY Cytochrome P450 11 393 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo4g02918 Pumo-Chr4 56382838 56387091 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo4g02918 22 395 Cytochrome P450 AT1G12740 65.610 0.0 551
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo4g02918 - - gmx:100812089 618.616