Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo4g02915 ATGGAACAATCAAGATTCCAAAACACGGTTCTATACAATAACATGGAACCTAGACATGATGAATACCACCAGCCTGGGTCACAGTCAGTGATGCAGGACCATATGGATGGCACACATGCCAGTAGAAGACCAGCTGACCTCAATACATCAGAAGTTAAACCTGTACTTAATTACTCCATACAGACAGGCGAGGAATTTGCTCTTGAATTTATGAGAGATAGGGTGAATATCAGGAAGCCTATGTTATCAAATGTCAGCGATTCCAATTATACCCCAGGTTATATGGAACTGAAAGGCATTTTAGGCATCAGTCATGCAGGATCTGAAAGTGGATCTGATATTTCTATGCTCTCAATGGTTGACAAATATCCAAAAGAGTTTGATAGGATGAATACATCATTACCTGGAGACAGAAGCAACTATGGGTCAATTCGATCGATGCCAAGAACTTCATTGAATCAGGACAATAGACAATTTATGCCTGGGTATGGCTCTTTTGGAGTTTATGATAGATCAATGATGATGAAGTTTCTTTGCAGCTTTGGTGGTAGAATATTGCCACGACCATGTGATGGAAAGCTAAGGTATGTTGGAGGGCAAACACGTATTCTTCGAATCAGAAAGGACATATCTTGGCAGGAGCTCATGCAGAAAGCATTACAAATCTATAATCAGGTTCATGCAATCAAGTATCAGCTTCCAGGGGAAGATCTTGATGCTTTGGTATCTGTGTCATCTGATGAGGATTTGCAGAATATGATGGAAGAATGTAATCATCTACTAGATAGAGAAGGATCACAAAAGCTTAGGATGTTTTTGTTCTCAATGAGTGATTTGGAGGATGCTCAGTTTGGTCTCAGCAGCATCGGTGATGATTCTGAGATCCAGTATGTTGTTGCTGTTAATGGCATGGATTTGGAATCAAGAAAAAACACAACCATGATTGGTGTCAGTTTTTCTGCAAATGATATAAATGAATTGGATAGGCAAAGTATTGACAGGGAGATTAGTAGAGTTGGTGTAGAATCTATTGCACAAGGTGCTCCCCTGACCAACAATTTTGACTCATCATTGGCTACTCAGTCTTCACCACCAGTGCTACCAACTTCCACAATTTCTTATGATGCGTATCCACAGTTTTATGGTGATCAAATGATGCGCCGTGGGGAACCTAGTGATCAATATATTATTAATCATGGCCTTAATCCTTCTCATGAACCTGTTATTGGAGAGACTCCTATCATTATGCCTCCTCATATGCTCGTTAATCAACAAGGGATTTTGAGTGAAGGCCTTCCACCTCGTGGAATACAAGTACAAAATTCAGAAATACCAGGAACATTGGCAAACAAGATGGTTGATAGTTCAATTCAACATGGAAGTGACCCTGGGAAAGTTTTAGCCTCAGAATTACCATCACCAGCTCCTGCCCAACTGCTTAACGGTTACATGAAAAATAATTTTCCAGAAGCATCAGTTGTAGTTACTGCACCAGAGGGGCATTCATTGCATCCAACAAAGATGGACAAGCTCCAGGATTATGAAGAGACTTCTTCTACATCTAGCAGTGCATTTGGTCCTGCTTATGCTGATTCCCACTCCAATGTAGCTGACTTGAGTTCTCTTCATCCTCCTCCTCTTCCTAAAAGAGTTTACTATTCGGAGAGAATTCCACGGGAACAACTAGAGTTGCTGAATCGGTCCTCAAAATCAGATGATACACACAGGTCTCAGTTTCATGTTTCAGATTTACTTTCTGACGTCAACCCACCAGATACAGTTACAGAATCTGGTGACAAGTTGCATGATGGAAATCTGCCTAATCTAACTGAGGAATTAGGCATCGCAGAAAAGCCCTTGCATGCAGATGGCTATGCTGTTAATAATGGGGCTGTCAATCATCAAATATACAAACAGGCACAGCTGCCTGATGCAAGCAGTCAGATGAAATCAAAGTTAACTGAGCATGTGAGTCCTGAGTTGAAGCAGGTATTATCGGACAATGGAGGACACAAAGATGTGATAAATAAGGATAATGTTGGGTTGGAAACGGAAATTTATAGTAACAATAACTATAACAAACCCCTAATTGATGAGACAAAAGCCAGCAAACCAGACTTGCCTAATTTGCACATGGTTTCTTCTGATAAGCACCTTGATGATCCAGCATCCAATCTTCCAGAGGTTGATTGGGGGGATACCTCTGTGAAGGAGTCTAATGAGGATATTAATGTGCAAGCCTTACCTGTTTCCGTAAATGGGAATACAACTACAGAAGATGATTCTGAAGAATTTCCTTCAAATGTTGTTTCCAAACAAGCACAAGGTGACATCCTTATTGATATTAATGATCGGTTCCCCCGTGAATTTTTCACTGATATGTTCTCTAAAGCAGTACTTGAAGAAGATCCCTCTAGTCTGCATCCATTAGCCTCAGATGGAGTGGGCTTAAGTGTAAACATGGAAAATCGTGATCCTAAACGATGGTCATATTTTCAAAAATTGGCTCAAGAAGGGATTGATAATGTGTCTCTTATTGACCAGGATCATCTTGGTTTTTCGCTAGGAAAAGTGGTTGGAGATAATAGGGCTCAACATGTTACACCTTTAACAACTGATGAAGTTTCTCTGAACCATGCAGAGTCCCACCTTGATTTTGTTGAAGAAAATAGAAGAGACTTGCATGGAAGGATTGGAGCAGAAACCACTGTTCTGAAGTCAAATTATGATAATTCCCAAGTTAACGACACTGAAAGTATGCAATTTGATGCTATGATGGAAAACATAAGAGCACAAGAGTCAGAATATGAGGTTGGGAAGTTTGAAAAAAGGAATAGCAATCTACCTCCTCCAGATCCTTCTTTAGGAGAGTTTGATACGAGTACCTTGCAGTTCATAATGAATGATGATCTTGAAGAGCTGAAGGAACTGGGTTCTGGTACCTTTGGGACTGTGTATCATGGAAAATGGAGAGGATCAGATGTTGCCATTAAAAGAATAAAAAAAATCTGCTTCACTGGTCGATCATCTGAGCAAGAGAGACTGACTGTAGAATTCTGGCGGGAAGCTGAAATTCTTTCCAAGCTTCATCATCCAAATGTGGTGGCATTTTATGGTGTAGTGCAGGATGGACCAGGAGGAACGATGGCTACTGTTGCAGAGTACATGGTGGATGGTTCTCTTAGGCATGTATTACTTCGCAAGGATAGGTATCTTGATCGTCGCAAGAGACTGATAATTGCAATGGATGCAGCTTTTGGAATGGAATATTTGCACTCAAAAAATATTGTACACTTTGACTTAAAATGTGACAATTTGTTAGTGAACTTGAAAGATCCTATGCGGCCTATATGCAAGGTTGGGGATTTTGGCTTGTCAAAAATTAAACGAAATACCTTGGTTTCTGGTGGTGTGCGGGGGACTCTTCCTTGGATGGCACCAGAGCTGCTGAATGGTAGCAGCAACAAGGTCTCAGAAAAGGTTGATGTGTTCTCCTTTGGCATAGTATTATGGGAGATTCTAACTGGTGAGGAGCCATATGCCAATATGCACTATGGTGCAATCATAGGTGGGATTGTGAATAACACATTAAGGCCAACAATCCCAGATCATTGTGATCATGAATGGAGAACACTGATGGAGCAGTGTTGGGCACCTAATCCTGCAGCCAGGCCATCCTTCACAGAAATAGCCAGTCGATTGCGCGTAATGTCTGCAGCTGCTAGCCAAACCAAAACACAGAAGGCATCTAAATGA 3756 0.41 MEQSRFQNTVLYNNMEPRHDEYHQPGSQSVMQDHMDGTHASRRPADLNTSEVKPVLNYSIQTGEEFALEFMRDRVNIRKPMLSNVSDSNYTPGYMELKGILGISHAGSESGSDISMLSMVDKYPKEFDRMNTSLPGDRSNYGSIRSMPRTSLNQDNRQFMPGYGSFGVYDRSMMMKFLCSFGGRILPRPCDGKLRYVGGQTRILRIRKDISWQELMQKALQIYNQVHAIKYQLPGEDLDALVSVSSDEDLQNMMEECNHLLDREGSQKLRMFLFSMSDLEDAQFGLSSIGDDSEIQYVVAVNGMDLESRKNTTMIGVSFSANDINELDRQSIDREISRVGVESIAQGAPLTNNFDSSLATQSSPPVLPTSTISYDAYPQFYGDQMMRRGEPSDQYIINHGLNPSHEPVIGETPIIMPPHMLVNQQGILSEGLPPRGIQVQNSEIPGTLANKMVDSSIQHGSDPGKVLASELPSPAPAQLLNGYMKNNFPEASVVVTAPEGHSLHPTKMDKLQDYEETSSTSSSAFGPAYADSHSNVADLSSLHPPPLPKRVYYSERIPREQLELLNRSSKSDDTHRSQFHVSDLLSDVNPPDTVTESGDKLHDGNLPNLTEELGIAEKPLHADGYAVNNGAVNHQIYKQAQLPDASSQMKSKLTEHVSPELKQVLSDNGGHKDVINKDNVGLETEIYSNNNYNKPLIDETKASKPDLPNLHMVSSDKHLDDPASNLPEVDWGDTSVKESNEDINVQALPVSVNGNTTTEDDSEEFPSNVVSKQAQGDILIDINDRFPREFFTDMFSKAVLEEDPSSLHPLASDGVGLSVNMENRDPKRWSYFQKLAQEGIDNVSLIDQDHLGFSLGKVVGDNRAQHVTPLTTDEVSLNHAESHLDFVEENRRDLHGRIGAETTVLKSNYDNSQVNDTESMQFDAMMENIRAQESEYEVGKFEKRNSNLPPPDPSLGEFDTSTLQFIMNDDLEELKELGSGTFGTVYHGKWRGSDVAIKRIKKICFTGRSSEQERLTVEFWREAEILSKLHHPNVVAFYGVVQDGPGGTMATVAEYMVDGSLRHVLLRKDRYLDRRKRLIIAMDAAFGMEYLHSKNIVHFDLKCDNLLVNLKDPMRPICKVGDFGLSKIKRNTLVSGGVRGTLPWMAPELLNGSSNKVSEKVDVFSFGIVLWEILTGEEPYANMHYGAIIGGIVNNTLRPTIPDHCDHEWRTLMEQCWAPNPAARPSFTEIASRLRVMSAAASQTKTQKASK 1251
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo4g02915 1251 CDD PB1_UP2 178 274 - -
Pumo4g02915 1251 ProSitePatterns Protein kinases ATP-binding region signature. 977 1002 IPR017441 GO:0005524
Pumo4g02915 1251 FunFam Octicosapeptide/phox/Bem1p domain kinase superfamily protein 1059 1251 - -
Pumo4g02915 1251 Gene3D Transferase(Phosphotransferase) domain 1 1058 1251 - -
Pumo4g02915 1251 Pfam Protein tyrosine and serine/threonine kinase 972 1234 IPR001245 GO:0004672|GO:0006468
Pumo4g02915 1251 MobiDBLite consensus disorder prediction 15 49 - -
Pumo4g02915 1251 PANTHER SERINE-THREONINE PROTEIN KINASE 219 1235 - -
Pumo4g02915 1251 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1096 1108 IPR008271 GO:0004672|GO:0006468
Pumo4g02915 1251 PRINTS Tyrosine kinase catalytic domain signature 1090 1108 IPR001245 GO:0004672|GO:0006468
Pumo4g02915 1251 PRINTS Tyrosine kinase catalytic domain signature 1053 1066 IPR001245 GO:0004672|GO:0006468
Pumo4g02915 1251 PRINTS Tyrosine kinase catalytic domain signature 1205 1227 IPR001245 GO:0004672|GO:0006468
Pumo4g02915 1251 PRINTS Tyrosine kinase catalytic domain signature 1161 1183 IPR001245 GO:0004672|GO:0006468
Pumo4g02915 1251 FunFam Octicosapeptide/phox/Bem1p domain kinase superfamily protein 194 276 - -
Pumo4g02915 1251 SMART PB1_new 189 276 IPR000270 GO:0005515
Pumo4g02915 1251 CDD STKc_MAP3K-like 977 1234 - -
Pumo4g02915 1251 FunFam Octicosapeptide/phox/Bem1p domain kinase superfamily protein 964 1058 - -
Pumo4g02915 1251 SUPERFAMILY CAD & PB1 domains 191 279 - -
Pumo4g02915 1251 MobiDBLite consensus disorder prediction 566 580 - -
Pumo4g02915 1251 SMART serkin_6 971 1237 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo4g02915 1251 ProSiteProfiles Protein kinase domain profile. 971 1236 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo4g02915 1251 Gene3D Phosphorylase Kinase; domain 1 958 1057 - -
Pumo4g02915 1251 MobiDBLite consensus disorder prediction 566 605 - -
Pumo4g02915 1251 SUPERFAMILY Protein kinase-like (PK-like) 957 1233 IPR011009 -
Pumo4g02915 1251 Gene3D - 193 276 - -
Pumo4g02915 1251 Pfam PB1 domain 191 274 IPR000270 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo4g02915 Pumo-Chr4 56213860 56222228 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo4g02915 1 582 MAP Kinase Kinase Kinase AT1G16270 38.404 9.72e-95 328
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-6 Pumo4g02915 PK_Tyr_Ser-Thr 1.1e-62 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo4g02915 - - gmx:100799639 2354.33