Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo4g02913 ATGCTTAAAACATCATCAATCTATAATGAAGCTCATGTGATAAAGTATCAGCTCCCTGGAGAAGATCTTGATGCGTTAGTTTCTGTATCTTCTGATGAGGATCTGCGGAATATGATGGAGGAATGTCATGATCTACAAGGCGGACGAGGATCAACTAAGCTTAGGATTTTTCTGTTCTCTTTAAATGATTTGGATGATACTCAGTTCGGTATAGGTAGCATTGATGGTGATTCTGAAATCCAGTATGTAGTTGCTGTTAATGGTATGGACATGGGTTCAAGAAGCAACTCAATCCTTCATGGTGAAATCGGCTCTACTAATAACTTGCATGAATTGAATGGACAAAATAATGAGAGGGAGACCAACAGAGCTCTTATGGACACATTTGGTGTTAGCAGTTCTTCCTTGACTGACAATGTTAAACCATCATTGGCTATTCAATCTTCACAACCAGTGCTTCCAATCTCCTCTAATGCTTATGAAACCCATCCATTCTTTTATGATGACCAGGTCATTCACCATGGGGAAGCTAATCAATATCCACTACAGCATGGTCTTGGTCCTTCCAACAACTCCGCTTGCAATCTCGGAGAGATTCCAGTTTCTATGCCTACTCATGGTCTTGTTAACCAAGGAATCATGAATGATGGACAATCATCCAGTGAGTTGCAGGTACAAATTTCAGCTATGCCAGAAACGCTGGTAAAAAGAAGGGGTGATAATTTCATTCATACAGGCAACGACCCAGGAAAAGTTTTCCCCTTGGAAGCACCACCATATCCTATTCCTTCGCAGCCATTTGAGGGCAATTTGCATGCTAATGTATCAGAGGCATCAGCTACAGCTGCTATATCAGAAGGTCTTCATCCTGCACTGCCATCAAAGAACAAGGGTAAGCACCAGCAGTCTGAAAATGCCTCTTCATTAACTAGTAGTATGAATCCCACACAGACTCCTAAGTCTGGTGAAGATGACTTCTATACTACATCCACTGATGCATTCAGCCGTGCTCATGTTGATGCTGAGTCCAATGTAATTGATTTCAGTTACCTTGAACCACCTCCACTTCCCAACAGAGTCTATTATTCAGAGAGAATTCCAAGGGACCAGGCAGATTTGCTAAACCGATCTACAAAGTCAGATGATGCTCATGGTTCTCACTTACTCATGTCAGATTTGCTTTCTGACTTCAGCCAGAAGAATTCAGTTACAGAATCCAGTGACATATTGCACAGTGGGAATATGTCAAATCTGAACATGATGTCCAGCTCATCAGCAAAGCCTTTGCAAGCAGATGGCCATGCCATTGATGATGGATTTGCCCCGCCACAGACATACAAACAGTTGCCTGATACAACAAGTAAGGTGAATTCAAAGTTATCACAGCATGTGAATTCTGAGTCAAAGCAAGTGTTAGAAGATAATAAAGTTTCTAGAAATGAGGATCAGGTCCTTAGTTCTGAAAACGAAACCAATCGCTCCAAAGAAAACCATAATATTCTCTTAGTTGATGAAACCAAAGGTACTGAACATCTTGCATTTCGTCGGGTTCCTTCTGTTGAACACAATCAGAATCTAGCATCTAAACTTCCAGACCTCAATTTGGCTGAGGTTTCTACCAGGGAGTCTGATAATGATACTAAGGTCCAAACCCAGCCTTTTCCTTTAACTGGAAACACAGGCCAAGAAGTGTCTCAAGATTTTCCCCCGGAAACTAAATCCAGACCTACTCAGGGCGACATTCTGATTGATATTGAGGACAGGTTTCCCCGTGATTTCCTTTATGACATGTTCTCCAAAGCAGTACTTTCTGAAGATTCCTCAAGCATTGGTCCATTACCAACAGATAGAGCAGGTTTGAGCTTAAACATGGACAATCATGAGCCTAAACGTTGGTCATATTTTCAGAACTTGGCCCAAGAGGGGTTTGATAATGTATCTCTAATTGATCAGGATAATCTCTCTTTTTCGTCTGCTGTGAGAAAAGTACAAGAGGGGGATAGTAAATCTCAGCCATCTGCTCCTCTACAAGCTGATAGTGTTTTGGCAGGACGCATGGAATCCCACCTAAATTTTGGTGAAGAAAATCAGAAAAATGTACCTGTAACAACTAAAGCAGAAGCAAGTATCTTTCACCAAAAATATGAGCATTCCCAACTAAAGGGCAATGAAAATAAAAACATGGATGCCATAATGGAAAACATACGACCACAGGAGTCTGAATACCAGGAGGGCAAGAATGAACCAAGGAATGCGGTTGTAGCAGGGGAATTTGACACCAGTACTGTGCAGTTCATAAAGAATGAAGATCTTGAAGAACTGCGAGAGCTGGGTTCTGGTACCTTTGGGACTGTGTACCATGGAAAATGGAGGGGATCAGATGTTGCAATTAAACGAATAAAGAAAAGCTGCTTTGCCGGTCGATCTTCAGAACAAGAGAGACTGACCATAGAGTTCTGGCGGGAAGCTGACATACTTTCCAAGCTTCACCATCCAAATGTGGTAGCGTTTTATGGTGTAGTTCAGGATGGACCAGGAGCAACATTAGCAACTGTTACTGAGTACATGGTGGATGGTTCTCTTAGGAATGTTTTGCTTCGTAAGGATAGGTATCTTGATCGCCGCAAGAGGCTGATAATTGCCATGGATGCGGCTTTTGGAATGGAATATTTACACTCAAAAAATATTGTGCATTTTGACTTGAAATGTGACAATTTGCTTGTGAACTTGAAGGATCCTTTACGGCCAATATGCAAGGTTGGCGATTTTGGCCTGTCAAAGATTAAGCGGAATACCCTGGTGTCCGGTGGTGTTCGTGGAACTCTACCTTGGATGGCACCAGAGCTGCTAAATGGTAGCAGCAATAAGGTCTCAGAAAAGGTTGATGTGTTCTCTTTTGGCATTGTATTATGGGAGATTCTTACTGGTGATGAGCCATATGCTAATATGCACTATGGTGCAATTATAGGAGGCATTGTGAATAACACATTAAGACCTACAATCCCCAGCTATTGTGATCTTGAGTGGAAAACACTAATGGAGCAGTGTTGGGCACCCAATCCTGCAGTCAGGCCATCCTTCACAGAAATCGCTCGCCGCTTGCGCGTGATGTCTGCAGCTGCTAGTCAGCTCAAAGGACAGGGCCACAAGGCATCTAAATGA 3162 0.4238 MLKTSSIYNEAHVIKYQLPGEDLDALVSVSSDEDLRNMMEECHDLQGGRGSTKLRIFLFSLNDLDDTQFGIGSIDGDSEIQYVVAVNGMDMGSRSNSILHGEIGSTNNLHELNGQNNERETNRALMDTFGVSSSSLTDNVKPSLAIQSSQPVLPISSNAYETHPFFYDDQVIHHGEANQYPLQHGLGPSNNSACNLGEIPVSMPTHGLVNQGIMNDGQSSSELQVQISAMPETLVKRRGDNFIHTGNDPGKVFPLEAPPYPIPSQPFEGNLHANVSEASATAAISEGLHPALPSKNKGKHQQSENASSLTSSMNPTQTPKSGEDDFYTTSTDAFSRAHVDAESNVIDFSYLEPPPLPNRVYYSERIPRDQADLLNRSTKSDDAHGSHLLMSDLLSDFSQKNSVTESSDILHSGNMSNLNMMSSSSAKPLQADGHAIDDGFAPPQTYKQLPDTTSKVNSKLSQHVNSESKQVLEDNKVSRNEDQVLSSENETNRSKENHNILLVDETKGTEHLAFRRVPSVEHNQNLASKLPDLNLAEVSTRESDNDTKVQTQPFPLTGNTGQEVSQDFPPETKSRPTQGDILIDIEDRFPRDFLYDMFSKAVLSEDSSSIGPLPTDRAGLSLNMDNHEPKRWSYFQNLAQEGFDNVSLIDQDNLSFSSAVRKVQEGDSKSQPSAPLQADSVLAGRMESHLNFGEENQKNVPVTTKAEASIFHQKYEHSQLKGNENKNMDAIMENIRPQESEYQEGKNEPRNAVVAGEFDTSTVQFIKNEDLEELRELGSGTFGTVYHGKWRGSDVAIKRIKKSCFAGRSSEQERLTIEFWREADILSKLHHPNVVAFYGVVQDGPGATLATVTEYMVDGSLRNVLLRKDRYLDRRKRLIIAMDAAFGMEYLHSKNIVHFDLKCDNLLVNLKDPLRPICKVGDFGLSKIKRNTLVSGGVRGTLPWMAPELLNGSSNKVSEKVDVFSFGIVLWEILTGDEPYANMHYGAIIGGIVNNTLRPTIPSYCDLEWKTLMEQCWAPNPAVRPSFTEIARRLRVMSAAASQLKGQGHKASK 1053
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo4g02913 1053 ProSiteProfiles Protein kinase domain profile. 771 1036 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo4g02913 1053 MobiDBLite consensus disorder prediction 420 497 - -
Pumo4g02913 1053 Gene3D Phosphorylase Kinase; domain 1 757 857 - -
Pumo4g02913 1053 MobiDBLite consensus disorder prediction 296 328 - -
Pumo4g02913 1053 MobiDBLite consensus disorder prediction 542 577 - -
Pumo4g02913 1053 ProSitePatterns Protein kinases ATP-binding region signature. 777 802 IPR017441 GO:0005524
Pumo4g02913 1053 MobiDBLite consensus disorder prediction 446 468 - -
Pumo4g02913 1053 PRINTS Tyrosine kinase catalytic domain signature 1005 1027 IPR001245 GO:0004672|GO:0006468
Pumo4g02913 1053 PRINTS Tyrosine kinase catalytic domain signature 890 908 IPR001245 GO:0004672|GO:0006468
Pumo4g02913 1053 PRINTS Tyrosine kinase catalytic domain signature 961 983 IPR001245 GO:0004672|GO:0006468
Pumo4g02913 1053 PRINTS Tyrosine kinase catalytic domain signature 853 866 IPR001245 GO:0004672|GO:0006468
Pumo4g02913 1053 CDD STKc_MAP3K-like 777 1034 - -
Pumo4g02913 1053 MobiDBLite consensus disorder prediction 241 269 - -
Pumo4g02913 1053 MobiDBLite consensus disorder prediction 545 573 - -
Pumo4g02913 1053 SMART serkin_6 771 1037 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo4g02913 1053 FunFam Octicosapeptide/phox/Bem1p domain kinase superfamily protein 764 858 - -
Pumo4g02913 1053 PANTHER SERINE-THREONINE PROTEIN KINASE 27 1035 - -
Pumo4g02913 1053 Pfam PB1 domain 11 59 IPR000270 GO:0005515
Pumo4g02913 1053 Pfam Protein tyrosine and serine/threonine kinase 772 1034 IPR001245 GO:0004672|GO:0006468
Pumo4g02913 1053 Gene3D Transferase(Phosphotransferase) domain 1 858 1052 - -
Pumo4g02913 1053 MobiDBLite consensus disorder prediction 289 328 - -
Pumo4g02913 1053 SUPERFAMILY Protein kinase-like (PK-like) 760 1033 IPR011009 -
Pumo4g02913 1053 ProSitePatterns Serine/Threonine protein kinases active-site signature. 896 908 IPR008271 GO:0004672|GO:0006468
Pumo4g02913 1053 FunFam Octicosapeptide/phox/Bem1p domain kinase superfamily protein 859 1051 - -
Pumo4g02913 1053 MobiDBLite consensus disorder prediction 469 497 - -
Pumo4g02913 1053 SUPERFAMILY CAD & PB1 domains 2 67 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo4g02913 Pumo-Chr4 56204349 56210230 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo4g02913 3 411 MAP Kinase Kinase Kinase AT1G16270 35.000 9.45e-56 209
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-6 Pumo4g02913 PK_Tyr_Ser-Thr 5.9e-62 CL0016