Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo4g02884 ATGTGGTTGCATTCTTGGGGTTTTGCTCGGATGGAAGTGGGAGACTTTTGGTGTGAGTATATGCCTCAGGGTGCGCTTAGCAAATATCTGATAAATTGGAAAGATGAAGGTTTAAAACCACTGGAGTGGAAAACAAGGCTTGTTATTGCCTTGGATGTTGCTAAAGGGGTTGAATACATACATGGTTTGATAGGACAAACTTTTGTCCATAGGGATCTAAAAACATCCAACATTTTGTTGGGAGATAATATGCGTGGTAAGGTATCAGACTTTGGATTGGTTCGAGTTGTTCCTAAAGGGAAGAACTCATGTGAAACTAAACAAATTGTTGGAACCCGTGGATATATTGCACCAGAGTATGCATCCACTAACCATTTTACAACAATGGTTGATGTATATAATTTTGGAGGCATTCTTATGCAGATGATAACTAGAAAGGAAATACTTGATGATAGTAAATGA 462 0.3831 MWLHSWGFARMEVGDFWCEYMPQGALSKYLINWKDEGLKPLEWKTRLVIALDVAKGVEYIHGLIGQTFVHRDLKTSNILLGDNMRGKVSDFGLVRVVPKGKNSCETKQIVGTRGYIAPEYASTNHFTTMVDVYNFGGILMQMITRKEILDDSK 153
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo4g02884 153 Gene3D Transferase(Phosphotransferase) domain 1 5 153 - -
Pumo4g02884 153 SUPERFAMILY Protein kinase-like (PK-like) 18 150 IPR011009 -
Pumo4g02884 153 ProSiteProfiles Protein kinase domain profile. 1 153 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo4g02884 153 PANTHER OSJNBA0070M12.3 PROTEIN 19 152 - -
Pumo4g02884 153 ProSitePatterns Serine/Threonine protein kinases active-site signature. 68 80 IPR008271 GO:0004672|GO:0006468
Pumo4g02884 153 SMART serkin_6 8 149 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo4g02884 153 Pfam Protein kinase domain 18 150 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo4g02884 Pumo-Chr4 55235155 55235616 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo4g02884 19 150 Receptor kinase-like Gene Family AT3G58690 42.537 7.90e-33 118
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-IX Pumo4g02884 Pkinase 1.1e-26 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo4g02884 K00924 - gmx:100788903 198.749