Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo4g02830 ATGGGCAACCTCTTTGGCAAAAATAAAAAGTGTCGCACTCAAAGTTCAAGCAATGATAATAAAGGAAGAGGTGGAAGAATCTACACTACCGTGACCAATAGAGGTTTACCACCCAATTTCCCAACTCAGTTACCTCAGTCACAGCCTCCACCACTATTGTATCCAACTCTGGAACCTCCGCCACTGCCACCGCCACCGCCACCGCCACCGCCACCGGCAGAACCACAATCCATGTTTAAGAAATCAAGTTTTGGGAGAGCTTACTCTAGCAAAGGCTCTTCAGTCATGAACAAAAAGCAATCTGCCAAGAAGTATGCTTTGATTCGTGATAACTTCTCCACCCTTGAACAGGTGACAACAGCCTTGAGGAAAGAAGGATTAGAATCATCAAATCTCATCCTTGGAATTGATTTTACAAAGAGCAATGAATGGACTGGCAGAATCTCATTCAATAAAAGAAGCCTGCATGCTATTGGAAGTACACCTAATCCTTATGAGAAGGCCATTTCTATTATTGGCAAGACTTTGGCTCCCTTTGATGATGATAACTTGATTCCATGCTTTGGCTTTGGTGATGCTACCACCCATGATCAAGAAGTGTTTAGCTTTCACAGTGATCATTCACCTTGCCATGGCTTTGAGGAAGTCTTGTCTTGCTACCAGAAAATAGTTCCAAACTTGAAACTTTCAGGGCCAACCTCTTATGCTCCGGTGATTGAGGCTGCTATAGACATAGTTGAGAAAAATCGTGGCCAATTCCATGTGTTACAAGAAGCTGTGGACACTGGAGATAAAGAACTCAGTCCTCAAGAAGAGAAGACAATTAAAGCAATCGTTGATGCAAGTGCATATCCCCTCGCTATAGTTCTGGTTGGAGTTGGTGATGGGCCTTGGGAAGACATGAGAAAGTTTGATGACAGGTTACCGGCACGTGATTATGACAATTTTCAGTTTGTTAATTTCACGGAGATCATGTCCAAAAACATAAGCCCCTCGGAGAAAGAAGCAGCTTTTGCTCTGGCTGCTCTCATGGAGATCCCCTTCCAATATAAAGCAACCATGGAATTTGGAATACTCGGACGTGTAACAGGAAGAGCAAAGAGAATAGTTCCAAAACCTCCTCCTGTTCCTTATTCTAGGCCTGCACCACCACCTGCGCGTGTACCCAGCAATACTGCAGCATCCTCCGGAGATGAGCAAAACCAAGCGGCCTGCGCTGTTTGTTTGACCAATCCAAGAGACTTGGCCTTTGGATGTGGGCACATGACTTGCAGGGATTGTGGATACAAGTTAACTAATTGTCCCATGTGCCGAGAGAGGATCACTAGTCGTCTCAGGGTGTACAGCGGGTGA 1353 0.4508 MGNLFGKNKKCRTQSSSNDNKGRGGRIYTTVTNRGLPPNFPTQLPQSQPPPLLYPTLEPPPLPPPPPPPPPPAEPQSMFKKSSFGRAYSSKGSSVMNKKQSAKKYALIRDNFSTLEQVTTALRKEGLESSNLILGIDFTKSNEWTGRISFNKRSLHAIGSTPNPYEKAISIIGKTLAPFDDDNLIPCFGFGDATTHDQEVFSFHSDHSPCHGFEEVLSCYQKIVPNLKLSGPTSYAPVIEAAIDIVEKNRGQFHVLQEAVDTGDKELSPQEEKTIKAIVDASAYPLAIVLVGVGDGPWEDMRKFDDRLPARDYDNFQFVNFTEIMSKNISPSEKEAAFALAALMEIPFQYKATMEFGILGRVTGRAKRIVPKPPPVPYSRPAPPPARVPSNTAASSGDEQNQAACAVCLTNPRDLAFGCGHMTCRDCGYKLTNCPMCRERITSRLRVYSG 450
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo4g02830 450 PANTHER COPINE FAMILY PROTEIN 1 86 425 - -
Pumo4g02830 450 MobiDBLite consensus disorder prediction 8 41 - -
Pumo4g02830 450 MobiDBLite consensus disorder prediction 42 76 - -
Pumo4g02830 450 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 391 449 IPR013083 -
Pumo4g02830 450 MobiDBLite consensus disorder prediction 370 388 - -
Pumo4g02830 450 MobiDBLite consensus disorder prediction 370 395 - -
Pumo4g02830 450 Pfam Zinc finger, C3HC4 type (RING finger) 403 443 - -
Pumo4g02830 450 SUPERFAMILY RING/U-box 398 444 - -
Pumo4g02830 450 SUPERFAMILY Formin homology 2 domain (FH2 domain) 63 143 - -
Pumo4g02830 450 MobiDBLite consensus disorder prediction 1 95 - -
Pumo4g02830 450 SUPERFAMILY vWA-like 130 305 IPR036465 -
Pumo4g02830 450 Pfam Copine 154 358 IPR010734 -
Pumo4g02830 450 ProSiteProfiles Zinc finger RING-type profile. 405 438 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo4g02830 Pumo-Chr4 52267185 52281360 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo4g02830 K16280 - gmx:100790153 710.679
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo4g02830 4 52267185 52281360 Pumo4g02830 4 52267185 52281360 ECH