Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo4g02814 ATGGCTGCTCAATTGCAAAAATCTGCAGATGAAATGAGGAAGAAGCTTCATGGTGATTCTTCAACGGTTGAACTCAATAATTCCAATACGGTTCCTTCCAAGGGTGCAAGTTCCCCTTCTGATGCAAGATCATGTGTATCATCCATAGGAGATGCTTCTGGTAGTGTTAAGGAAGTTGATGTGGATCATGAGTACTTGTCCACAGATCAGGGTCTTCCTTATCCTGCTGGTGGCTATTATGGTTACTACTATCCAGGTTATGGTGGTTTCTATGGAGAGTCAGACAACCAAGGTTACTATGTTGGTGCGGATGCGGTGGATCTTCAGTACCCTGTCATGCAAGCAGATAATGGATCTTATGTCTATCTCGTGCCAGGATTTCAGACTGGCTACCCTTCATACTTTCCTCTAAGTCCAGCTGGTGTTGAAGGACAGTATGTTGGCCATAACGTCTACCCTCCTGGCTCCATCTTTCAACAACCGATTGGATCGCCTGGTTATTATCCAGCTTCTCTATATGGAGAGTTACCGCCATCAACATACTCATGGGATTCACCTCTAATCACACAAGATGGGTTTCAAGGACATGGTTATAATGAGCAGGCTGGTAAACCAAATGGTAGATCCAATTTGTCTTCCCAGAGTCATACAGGTGGTGTTGTGTCAAAGTCTGCACCCCCACCTAACTCGGCAGAATTGAAGGGTTCGACACCATTATTAGAGGTCTCGTCGACTCATGTTAAGCGTAACCAGCCAAAACAAACAAACAAGGCACCCGTTTCGGTCCTCCATTCACCTGTTGCCAAGTTTCCTGCATACAATCAAGGAAAGAGTGGATTCCTCTATCCAAACAACTTGCTTAATGTGAAAGCAAACACAAAGGGCTGGGTTAGTACTGAAAAGTTGAAAATGAGAAACAAGGTCAACGATTCACTCAATGAGCAGAATCAAGGTCCTAGAACTGCTAATGCAAAAGGTGCATTAGTGTCTGGAGGTAATTCTGTGAGAGGCTCAGCCCTAGGTGGGAGTGGAAATGTTTCAAGCAAAATCAGGACAGATCAATACAACCTTCCTGATTTTCCAACCAAATACGATCATGCACTTTTCTTTGTCATCAAATCATACAGTGAAGATGATATCCACAAGAGCATCAAGTACAACGTGTGGGCGAGTACTCCTAATGGGAACAAGAGGCTGGATGGTGCATTTCAGGATGCACAGAAGAGAATGGAAGAGAAAGGATGCAAGTGCCCCGTGTTCCTTTTCTTTTCGGTCAATGCTAGCGGTCAATTTTGCGGAGTAGCTGAGATGACTGGGCGAGTTGATTTCAATAAAAGTATGGATTTCTGGCAACAAGATAAATGGAATGGATATTTCCCTGTCAAATGGCACATTATAAAGGATGTTCCAAATCCTCAACTACGGCACATAATACTCGAGAATAATGATCACAAGCCTGTCACAAATAGTAGAGACACACAAGAGGTCTGCATTTTGCAATTTCTATTAAAAGCAACAATCTACTGA 1527 0.4335 MAAQLQKSADEMRKKLHGDSSTVELNNSNTVPSKGASSPSDARSCVSSIGDASGSVKEVDVDHEYLSTDQGLPYPAGGYYGYYYPGYGGFYGESDNQGYYVGADAVDLQYPVMQADNGSYVYLVPGFQTGYPSYFPLSPAGVEGQYVGHNVYPPGSIFQQPIGSPGYYPASLYGELPPSTYSWDSPLITQDGFQGHGYNEQAGKPNGRSNLSSQSHTGGVVSKSAPPPNSAELKGSTPLLEVSSTHVKRNQPKQTNKAPVSVLHSPVAKFPAYNQGKSGFLYPNNLLNVKANTKGWVSTEKLKMRNKVNDSLNEQNQGPRTANAKGALVSGGNSVRGSALGGSGNVSSKIRTDQYNLPDFPTKYDHALFFVIKSYSEDDIHKSIKYNVWASTPNGNKRLDGAFQDAQKRMEEKGCKCPVFLFFSVNASGQFCGVAEMTGRVDFNKSMDFWQQDKWNGYFPVKWHIIKDVPNPQLRHIILENNDHKPVTNSRDTQEVCILQFLLKATIY 508
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo4g02814 508 Gene3D ph1033 like domains 344 500 - -
Pumo4g02814 508 PANTHER YTH YT521-B HOMOLOGY DOMAIN-CONTAINING 96 498 IPR045168 -
Pumo4g02814 508 MobiDBLite consensus disorder prediction 1 49 - -
Pumo4g02814 508 ProSiteProfiles YTH domain profile. 367 508 IPR007275 GO:0003723
Pumo4g02814 508 CDD YTH 369 496 IPR007275 GO:0003723
Pumo4g02814 508 MobiDBLite consensus disorder prediction 310 329 - -
Pumo4g02814 508 MobiDBLite consensus disorder prediction 192 235 - -
Pumo4g02814 508 Pfam YT521-B-like domain 369 496 IPR007275 GO:0003723
Pumo4g02814 508 MobiDBLite consensus disorder prediction 203 224 - -
Pumo4g02814 508 MobiDBLite consensus disorder prediction 21 49 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo4g02814 Pumo-Chr4 52025062 52030124 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo4g02814 K20102 - gmx:100791190 964.14
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo4g02814 4 52025062 52030124 Pumo4g02814 4 52025062 52030124 ECH