Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo4g02808 ATGGTGAGAAATGACTCGTTGGACTACCCTTTGCTTGTTCCAAATGGTTCTTATGTCCACACCGCAAATGGCTGTGTGAGATGCACCTGCGATGCTTCCAACAACTGGACATTATCATGCGAGCCATCCAAGCTCAAACCAACTAACTGGTCTACTTGCCCATCTATGCAATGCGGCAATGCAAGCAACATGTACATTGGTAACACCTCATATTCAAGTTCTGATCACAATCATAAAATCTGTGCCTACGCTGGTTATGGAAGTCAAACTATCTTCACAACTCTTGCAGCAGTGTCTATTCCTCCCGGTTTGGTGCACACGCATGACACAATGGAGAGAAAGAAGATGCAGGAAAAGATATTACATGACATTGGAGGTAATGCAATGCTTTCAATGGTGTACGGCAAAACCATAAAAAGTAATAACAAGGGAAAGACAAGCAATGAAGTTGAAATATTTGCTTTTGATACCATCGCTGCTGCCACAAACCATTTCTCAGCTGCTAATAAGCTAGGAGAAGGTGGTTTTGGTCCAGTTTATAAGGGAACATTAAGTGATCAGCAAGAACTAGCAATAAAGCGACTTTCAAAAAGTTCAGGACAAGGGGTAATAGAGTTTACGAATGAAGCCAAACTCATGGCCAAACTCCAGCACACTAATCTTGTAAAGCTTTTAGGGTTCTGCATCCAGAGAGATGAAAGAATATTGGTATATGAGTACATGTCTAACAAGAGCTTAGACTTCTACCTATTTGATTCAGCTAGAAAGAATTTGCTAGACTGGGAAAAACGGTTGAACATTATTGGAGGCATTGCTCAAGGACTTCTTTATCTTCACAAGTATTCAAGACTAAAAGTGATACATCGGGACTTGAAAACAAGCAATATATTGCTTGATGATGAGATGAATCCTAAGATATCTGACTTTGGCATGGCTCGAATATTTGGTGTAAGAGCATCGGAAGAAAACACTAATAGAGTTGTTGGTACATATGGATACATGACTCCAGAGTATGCAATAAATGGTGTTGTGTCCATCAAAATAGATGTATTCAGCTTTGGTGTCTTGCTGTTAGAGATACTTAGTGGCAAGAAGAATAATAGTCGCTATCATTCGGATCGCCCACTCAACCTCATAGGATACACGTGGCAGCTCTGGAATGAAGGCAGAGCTCTGGAGCTAATAGACCCAGCAATAAATGAATTATGTTCTCATAATCAAGTTTTGAGATGTATTCATATTGGCCTGTTGTGCGTACAAGATCAGGCGACAGATAGACCTAGCATGTTAGATATTGTTTCTTTTCTATCAAATGATACAATCCAACTTCCCCAGCCAAAGCAGCCAGCATTCTTCATCAATGTGGTTCTGGAAGAGACGGAGCTTTCTTACAGCAGGCAAGAACATCATTCTTTAAATGACGTAACAATTTCTAGTTTCAATGGAAGATAA 1452 0.4015 MVRNDSLDYPLLVPNGSYVHTANGCVRCTCDASNNWTLSCEPSKLKPTNWSTCPSMQCGNASNMYIGNTSYSSSDHNHKICAYAGYGSQTIFTTLAAVSIPPGLVHTHDTMERKKMQEKILHDIGGNAMLSMVYGKTIKSNNKGKTSNEVEIFAFDTIAAATNHFSAANKLGEGGFGPVYKGTLSDQQELAIKRLSKSSGQGVIEFTNEAKLMAKLQHTNLVKLLGFCIQRDERILVYEYMSNKSLDFYLFDSARKNLLDWEKRLNIIGGIAQGLLYLHKYSRLKVIHRDLKTSNILLDDEMNPKISDFGMARIFGVRASEENTNRVVGTYGYMTPEYAINGVVSIKIDVFSFGVLLLEILSGKKNNSRYHSDRPLNLIGYTWQLWNEGRALELIDPAINELCSHNQVLRCIHIGLLCVQDQATDRPSMLDIVSFLSNDTIQLPQPKQPAFFINVVLEETELSYSRQEHHSLNDVTISSFNGR 483
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo4g02808 483 ProSitePatterns Serine/Threonine protein kinases active-site signature. 286 298 IPR008271 GO:0004672|GO:0006468
Pumo4g02808 483 SUPERFAMILY Protein kinase-like (PK-like) 148 466 IPR011009 -
Pumo4g02808 483 ProSiteProfiles Protein kinase domain profile. 165 441 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo4g02808 483 SMART serkin_6 165 436 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo4g02808 483 Gene3D Phosphorylase Kinase; domain 1 138 240 - -
Pumo4g02808 483 Pfam Domain of unknown function (DUF3403) 438 483 IPR021820 GO:0004674
Pumo4g02808 483 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 53 479 - -
Pumo4g02808 483 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 241 444 - -
Pumo4g02808 483 Gene3D Transferase(Phosphotransferase) domain 1 241 447 - -
Pumo4g02808 483 CDD STKc_IRAK 171 436 - -
Pumo4g02808 483 Pfam Protein tyrosine and serine/threonine kinase 168 436 IPR001245 GO:0004672|GO:0006468
Pumo4g02808 483 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 131 240 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo4g02808 Pumo-Chr4 51882902 51886064 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo4g02808 19 451 Receptor kinase-like Gene Family AT4G23230 46.813 8.29e-131 391
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pumo4g02808 PK_Tyr_Ser-Thr 3.4e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo4g02808 - - gmx:100794508 657.136