Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo4g02802 ATGGGAACACCTGTGAACATCATCGTTGGATCACAGGTTTGGGTTGAGGATCCTGAGGATGCATGGATTGATGGTGAGGTGACACAAATCAAAGGCAAAAATGCCACCATCATTACCACAAATGGGAAAACTGTGGTGGCAGAAATTTCAAGCATATACCCCAAAGATACAGAGGCACCACCTGCAGGAGTTGATGACATGACCAAGCTAGCATACCTTCATGAGCCAGGAGTCCTGCATAACCTTGCAACTCGTTTTTCTCTCAATGAGATATATACATATACAGGGAATATCTTAATTGCGGTGAATCCTTTTCGAAGACTGCCACACTTGTATGACGTCCATATGATGGAGCAGTACAAAGGAGCAGCATTTGGAGAGCTTAGTCCTCACCTTTTTGCTGTAGCTGACACATGTTACAGGGCAATGATAAATGAAAATGGAAGTCAATCCATTTTGGTAAGCGGAGAGAGTGGAGCCGGTAAAACTGAGACAACGAAAATGCTCATGAGATATCTAGCATTCATGGGGGGTAGATCTGCTACAGAAGGAGGAAGAACTGTAGAACAACAGGTTTTGGAGTCTAATCCAGTGTTGGAAGCATTTGGAAATGCCAAAACTGTCAAAAACAACAATTCAAGTCGTTTTGGTAAATTTGTTGAAATTCAATTTGACAAGAATGGGAAGATTTCTGGAGCTGCAATCCGTACATATCTCCTCGAAAGGTCACGAGTTTGCCAGGCCTCCGACCCAGAGAGAAACTATCATTGCTTTTACATGCTTTGTGCAGCACCACCAGAGGATGTCAAGAAGTACAAGTTAGGGGATCCAAGGCAATTCCACTATCTTAATCAATCAAACTGTTATAAAGTGTCGAATGTGGATGATGCAAAAGAGTACTTGGAGACCAGAAATGCAATGGATATTGTAGGCATTAGCCAAGAAGAGCAGGATGCTATCTTTCGTGTGGTAGCTGCAATCCTTCATCTTGGAAACATTGACTTTGTCAAAGGGAAAGAAGTTGATTCTTCCAAATTGAAAGATGATAAATCACTCTTCCACCTCCGAACAGCTGCAGAGCTATTCATGAGTGATGCGAAAGCACTAGAAGACTCACTTTGCGAGCGTGTCATTGTAACTCCTGATGGTAACATTACCAAACCTCTAGACCCAGATGCAGCTGCTTTGAGCCGAGATGCCTTGGCAAAGACTGTCTACTCCAAATTGTTTGATTGGATTGTGGACAAGATTAACAGTTCAATTGGTCAAGATTCCAATGCAGTAAGCATAATAGGAGTCCTTGACATTTATGGATTTGAAAGCTTCAAAATCAACAGTTTTGAGCAACTATGCATCAACCTAACCAATGAGAAGTTGCAACAGCATTTTAATCAGCATGTATTCAAGATGGAGCAAGAAGAGTACACAAAGGAGGAAATCAATTGGAGCTATGTAGAATTTGTGGATAATCAGGATGTTCTTGATCTTATTGAGAAGAAACCAGGGGGAATTATTGCTCTTCTTGATGAAGCCTGCATGTTCCCCAAATCAACTCATGAGACTTTTGCACAAAAGATGTACCAGACATATAAAGCACACAAGCGCTTCAGCAAGCCAAAACTTGCTCGAACAGATTTCACGATTAACCATTATGCTGGAGATGTCACATATCAAGCAGATTATTTTCTAGATAAAAACAAAGATTATGTTGTAGCAGAGCATCAAGCTCTTTTATGTGCTTCCAAGTGCCCATTTGTTGCTAATCTCTTCCCTCCTTTACCAGAGGAGACATCAAAGCAATCAAAATTCTCTTCCATTGGTTCACAGTTTAAGCAACAACTGCAATCTCTCATGGAGACACTGAACACAACAGAACCGCATTACATAAGATGTGTGAAACCAAATACAGTTCTGCAGCCAGGAATCTTTGAGAACTTCAATGTCTTGAACCAATTAAGATGTGGGGGAGTACTTGAGGCAATAAGGATTAGTTGTGCTGGATATCCAACAAAAAGGACATTTGAAGAATTTCTTGATCGCTTTGGAATGCTAGCTCCTGATGTCCTTGATGGCTCTGATGAGAAAAAGGCATCTATGGCCATCTGTGATAAGATGGGCTTAAAAGGCTATCAAATGGGGAAAACAAAGGTATTTCTCAGAGCTGGTCAGATGGCTGAATTAGATGCACGAAGAGCCGAAGTCTTAGCTAAAGCGGCTAAACTTATACAGAGACAAATCCGAACACATTTAACCAGAAAGGAGTTCATCACCCTGAGAAAGGCCACAATTCATATCCAGAAGATTTGGAGAGCTAAACTTGCACGTAAACTCTATGAGGATATGAGGAAGGAAGCAGCTTCTATCAGGATACAGAAACATGTGCGTGCCCACAGAGCAAGAATGAATTATACAACGTTACAAGCATCAGCTATAGTTATTCAATCAGGGTTGAGAGCATTAGCAGCACGAAATGAATATAGGTACAGAAGAAGAACAAAGGCTTCAATAAAAATTCAGACACAATGGAGAAGAGCCCAAGCTCTTTCTGGTTACAAACAGCAGAAGAAAGCAACTGTTTCACTTCAATGTCTATGGAGAGCTAGAGTAGCAAGGAAAGAGCTCAGAAAGCTTCGGATGGCTGCAAGGGAAACTGGGGCACTTAAGGAAGCAAAGGACAAGTTGGAGAAGCGTGTTGAGGAGCTTACATGGAGACTAGATATTGAAAAGCACATGAGGGTAGAGAATCTCAACTAG 2754 0.4143 MGTPVNIIVGSQVWVEDPEDAWIDGEVTQIKGKNATIITTNGKTVVAEISSIYPKDTEAPPAGVDDMTKLAYLHEPGVLHNLATRFSLNEIYTYTGNILIAVNPFRRLPHLYDVHMMEQYKGAAFGELSPHLFAVADTCYRAMINENGSQSILVSGESGAGKTETTKMLMRYLAFMGGRSATEGGRTVEQQVLESNPVLEAFGNAKTVKNNNSSRFGKFVEIQFDKNGKISGAAIRTYLLERSRVCQASDPERNYHCFYMLCAAPPEDVKKYKLGDPRQFHYLNQSNCYKVSNVDDAKEYLETRNAMDIVGISQEEQDAIFRVVAAILHLGNIDFVKGKEVDSSKLKDDKSLFHLRTAAELFMSDAKALEDSLCERVIVTPDGNITKPLDPDAAALSRDALAKTVYSKLFDWIVDKINSSIGQDSNAVSIIGVLDIYGFESFKINSFEQLCINLTNEKLQQHFNQHVFKMEQEEYTKEEINWSYVEFVDNQDVLDLIEKKPGGIIALLDEACMFPKSTHETFAQKMYQTYKAHKRFSKPKLARTDFTINHYAGDVTYQADYFLDKNKDYVVAEHQALLCASKCPFVANLFPPLPEETSKQSKFSSIGSQFKQQLQSLMETLNTTEPHYIRCVKPNTVLQPGIFENFNVLNQLRCGGVLEAIRISCAGYPTKRTFEEFLDRFGMLAPDVLDGSDEKKASMAICDKMGLKGYQMGKTKVFLRAGQMAELDARRAEVLAKAAKLIQRQIRTHLTRKEFITLRKATIHIQKIWRAKLARKLYEDMRKEAASIRIQKHVRAHRARMNYTTLQASAIVIQSGLRALAARNEYRYRRRTKASIKIQTQWRRAQALSGYKQQKKATVSLQCLWRARVARKELRKLRMAARETGALKEAKDKLEKRVEELTWRLDIEKHMRVENLN 917
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo4g02802 917 Gene3D Kinesin motor domain 65 663 IPR036961 -
Pumo4g02802 917 ProSiteProfiles IQ motif profile. 783 809 IPR000048 GO:0005515
Pumo4g02802 917 CDD MYSc_Myo11 76 720 IPR036018 -
Pumo4g02802 917 PRINTS Myosin heavy chain signature 430 458 IPR001609 GO:0003774|GO:0005524|GO:0016459
Pumo4g02802 917 PRINTS Myosin heavy chain signature 197 224 IPR001609 GO:0003774|GO:0005524|GO:0016459
Pumo4g02802 917 PRINTS Myosin heavy chain signature 483 511 IPR001609 GO:0003774|GO:0005524|GO:0016459
Pumo4g02802 917 PRINTS Myosin heavy chain signature 149 174 IPR001609 GO:0003774|GO:0005524|GO:0016459
Pumo4g02802 917 PRINTS Myosin heavy chain signature 92 111 IPR001609 GO:0003774|GO:0005524|GO:0016459
Pumo4g02802 917 Coils Coil 724 744 - -
Pumo4g02802 917 Gene3D - 833 882 - -
Pumo4g02802 917 Gene3D - 785 832 - -
Pumo4g02802 917 Gene3D - 733 784 - -
Pumo4g02802 917 FunFam Myosin 2 313 430 - -
Pumo4g02802 917 ProSiteProfiles IQ motif profile. 735 762 IPR000048 GO:0005515
Pumo4g02802 917 Gene3D Myosin VI head, motor domain, U50 subdomain 313 602 - -
Pumo4g02802 917 PANTHER MYOSIN 54 900 - -
Pumo4g02802 917 FunFam unconventional myosin-Va 737 785 - -
Pumo4g02802 917 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 786 883 IPR027417 -
Pumo4g02802 917 SMART iq_5 853 875 IPR000048 GO:0005515
Pumo4g02802 917 SMART iq_5 757 779 IPR000048 GO:0005515
Pumo4g02802 917 SMART iq_5 805 827 IPR000048 GO:0005515
Pumo4g02802 917 SMART iq_5 782 804 IPR000048 GO:0005515
Pumo4g02802 917 SMART iq_5 830 852 IPR000048 GO:0005515
Pumo4g02802 917 SMART iq_5 734 756 IPR000048 GO:0005515
Pumo4g02802 917 FunFam Class V myosin 440 579 - -
Pumo4g02802 917 SMART MYSc_2a 56 733 IPR001609 GO:0003774|GO:0005524|GO:0016459
Pumo4g02802 917 Pfam Myosin N-terminal SH3-like domain 10 47 IPR004009 GO:0003774|GO:0005524|GO:0016459
Pumo4g02802 917 Pfam Myosin head (motor domain) 64 720 IPR001609 GO:0003774|GO:0005524|GO:0016459
Pumo4g02802 917 ProSiteProfiles IQ motif profile. 854 883 IPR000048 GO:0005515
Pumo4g02802 917 FunFam unconventional myosin-Va 834 881 - -
Pumo4g02802 917 Pfam IQ calmodulin-binding motif 808 827 IPR000048 GO:0005515
Pumo4g02802 917 Pfam IQ calmodulin-binding motif 785 803 IPR000048 GO:0005515
Pumo4g02802 917 Pfam IQ calmodulin-binding motif 737 755 IPR000048 GO:0005515
Pumo4g02802 917 Pfam IQ calmodulin-binding motif 759 778 IPR000048 GO:0005515
Pumo4g02802 917 Pfam IQ calmodulin-binding motif 856 875 IPR000048 GO:0005515
Pumo4g02802 917 Gene3D - 668 730 - -
Pumo4g02802 917 Gene3D - 440 624 - -
Pumo4g02802 917 ProSiteProfiles IQ motif profile. 758 787 IPR000048 GO:0005515
Pumo4g02802 917 ProSiteProfiles IQ motif profile. 806 835 IPR000048 GO:0005515
Pumo4g02802 917 Gene3D - 253 311 - -
Pumo4g02802 917 FunFam Myosin heavy chain 253 308 - -
Pumo4g02802 917 FunFam unconventional myosin-Va 786 833 - -
Pumo4g02802 917 ProSiteProfiles Myosin motor domain profile. 62 732 IPR001609 GO:0003774|GO:0005524|GO:0016459
Pumo4g02802 917 ProSiteProfiles Myosin N-terminal SH3-like domain profile. 8 57 IPR004009 GO:0003774|GO:0005524|GO:0016459
Pumo4g02802 917 Coils Coil 877 911 - -
Pumo4g02802 917 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 34 786 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo4g02802 Pumo-Chr4 51800110 51806389 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo4g02802 1 912 Myosins gene family AT1G08730 73.275 0.0 1437
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo4g02802 K10357 - gmx:100786418 1784.23