Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo4g02795 ATGAAGTATGTGTTGGTGACAGGTGGTGTTGTGAGTGGACTTGGGAAAGGAGTCACTGCCAGCAGTATTGGGTTAATCCTCAATGCCTGTGGTCTTAGAGTTACCTCTATCAAGATTGACCCCTACTTGAACACTGATGCGGGAACAATGTCTCCTTTTGAGCATGGAGAGGTTTTTGTCTTGGATGATGGTGGTGAGGTTGACCTTGATCTTGGAAACTATGAACGTTTCTTGGACATCAAATTAACTCGTGACAATAATATCACTACTGGAAAAATATATCAGTCTGTTATTGGGAAGGAGAGAAGAGGAGATTATCTTGGAAAGACTGTACAGGTTGTTCCACACATAACAGATGCTATCCAAGAGTGGATAGAACGTGTAGCAAAGATACCAGTTGATGGGAAAGAAGGGCCAGCTGATGTTTGTGTCATTGAATTGGGTGGAACTATAGGGGATATTGAGTCCATGCCTTTTATTGAAGCACTTGGCCAATTTTCATACCGTGTAGGCCCTGGCAACTTCTGTTTGGTTCATGTTAGCCTGGTTCCTATTCTCCATGTTGTTGGTGAACCGAAAACAAAGCCAACTCAGCACAGTGTTCGTCAACTTAGAGGATTAGGTTTGACCCCTAATCTTCTTGCTTGTCGCAGTTCGAAGGTGTGTTTCTTGTTTTCTTTTTTTATATTCTGTTGTCTCCTTGGAATAATGATTAAAATATCTATATCTGACTTGTCCTTTTACCAGGAACTTGATGACAATGTCAAGGCAAAACTTGCTCAATTTTGTCATGTGCCGCTGTCAAATATACTTACTCTCCATGACGTTCCAAATATTTGGCACATTCCTTTGCTATTGAAAGACCAGAAGGCACATGAGGCGATCCTGAAAGCATTAAACTTGCTAGGTGTTGCTGCAGAGCCTAATTTGAAGGAGTGGACTGCAAGGACAAGAGTTTATGACAGATGTCATGAAATTGTTAGAATTGCAATGGTGGGAAAATACACTGGCCTTTCAGATGCATATCTTTCTGTTCTGAAGGCACTTTTACATGCTTCTGTTGCTCGAAACCGTAAACTTATCGTGGACTGGGTTCCGGCTGGGGATCTTGAAGATGCTACTTATAAGGAGGATCCTGAAGCGTATAAAGCTGCTTGGAGTCTGTTAAAGGGTGCTAACGGGGTTCTAGTTCCAGGAGGTTTTGGTGATAGAGGAGTGCAAGGGAAAATTCTTGCTGCTAAGTATGCTCGAGAACATAATGTTCCATTTCTTGGCATTTGCCTGGGGATGCAAATTGCTGTTATTGAGTTTGCACGATCTGTTCTCGGTCTGCATGATGCTACTAGCACGGAATTTAATCCTGAAACCAAGACCCCTTGTGTCATATTTATGCCAGAAGGCTCAAAGACTCATATGGGAGGAACTATGCGTCTTGGTTCAAGAAGAACTTACTTTGAAGTTGCTGACTGCAAATCCGCAAAATTGTATGGCAATGTAAGCTTTGTTGATGAGCGACATCGGCATAGATATGAGGTTAACCCTGACATGATATCACAGCTAGAGAATGCTGGTCTATCTTTCGTTGGCAAAGATGAAACTGGGAGGCGCATGGAAATAGTTGAATTGCCTAGCCATCCTTTTTTTATTGGCGTTCAGTTTCACCCTGAGTTCAAGTCTAGACCAGGGAAACCTTCTCCACTCTTCTTAGGATTAATAGCAGCAGCAAGTGAACCAAGGAGGACAATGCCGCCAAGTAATGGTCACGCCAAGTTAACTAATGGAATGTGCAATGGACATGGACATGGACATGGACACTCACCAAAACTGAAAGCACACCAAAAGGGCAATGGCTTCAAGTCATCCAATGGTTCCTTAAATGGTATATATACCAATGGCAATGGGGTGTATGTGGATGGTAGTTGTTAG 1926 0.4263 MKYVLVTGGVVSGLGKGVTASSIGLILNACGLRVTSIKIDPYLNTDAGTMSPFEHGEVFVLDDGGEVDLDLGNYERFLDIKLTRDNNITTGKIYQSVIGKERRGDYLGKTVQVVPHITDAIQEWIERVAKIPVDGKEGPADVCVIELGGTIGDIESMPFIEALGQFSYRVGPGNFCLVHVSLVPILHVVGEPKTKPTQHSVRQLRGLGLTPNLLACRSSKVCFLFSFFIFCCLLGIMIKISISDLSFYQELDDNVKAKLAQFCHVPLSNILTLHDVPNIWHIPLLLKDQKAHEAILKALNLLGVAAEPNLKEWTARTRVYDRCHEIVRIAMVGKYTGLSDAYLSVLKALLHASVARNRKLIVDWVPAGDLEDATYKEDPEAYKAAWSLLKGANGVLVPGGFGDRGVQGKILAAKYAREHNVPFLGICLGMQIAVIEFARSVLGLHDATSTEFNPETKTPCVIFMPEGSKTHMGGTMRLGSRRTYFEVADCKSAKLYGNVSFVDERHRHRYEVNPDMISQLENAGLSFVGKDETGRRMEIVELPSHPFFIGVQFHPEFKSRPGKPSPLFLGLIAAASEPRRTMPPSNGHAKLTNGMCNGHGHGHGHSPKLKAHQKGNGFKSSNGSLNGIYTNGNGVYVDGSC 641
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo4g02795 641 CDD GATase1_CTP_Synthase 327 572 IPR033828 GO:0003883|GO:0006241
Pumo4g02795 641 CDD CTPS_N 2 297 IPR017456 GO:0003883|GO:0006221
Pumo4g02795 641 FunFam CTP synthase 1 223 - -
Pumo4g02795 641 Pfam Glutamine amidotransferase class-I 338 573 IPR017926 -
Pumo4g02795 641 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 249 301 IPR027417 -
Pumo4g02795 641 Gene3D - 234 321 IPR027417 -
Pumo4g02795 641 SUPERFAMILY Class I glutamine amidotransferase-like 327 577 IPR029062 -
Pumo4g02795 641 PANTHER CTP SYNTHASE 1 578 IPR004468 GO:0003883|GO:0006221
Pumo4g02795 641 FunFam CTP synthase 324 586 - -
Pumo4g02795 641 ProSiteProfiles Glutamine amidotransferase type 1 domain profile. 328 581 - -
Pumo4g02795 641 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1 220 IPR027417 -
Pumo4g02795 641 Gene3D - 1 223 IPR027417 -
Pumo4g02795 641 Gene3D - 324 584 IPR029062 -
Pumo4g02795 641 Pfam CTP synthase N-terminus 2 220 IPR017456 GO:0003883|GO:0006221
Pumo4g02795 641 Pfam CTP synthase N-terminus 249 301 IPR017456 GO:0003883|GO:0006221
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo4g02795 Pumo-Chr4 51547155 51553079 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo4g02795 K01937 - gmx:100816167 1150.58
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo10g02529 10 43379171 43388287 Pumo4g02795 4 51547155 51553079 PCT